RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 ITPRIPQ8IWB1 547 aa25■■□□□ 1.59
ABCA3-206ENST00000569062 PRDM10Q9NQV6 1147 aa25■■□□□ 1.59
ABCA3-206ENST00000569062 FZD1Q9UP38 647 aa25■■□□□ 1.59
ABCA3-206ENST00000569062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25■■□□□ 1.59
ABCA3-206ENST00000569062 PHKA1P46020 1223 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 TIMM10P62072 90 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 SPDYE2Q495Y8 402 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 RASAL3Q86YV0 1011 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 C1orf115Q9H7X2 142 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 ZNF70Q9UC06 446 aaPredicted RBP24.99■■□□□ 1.59
ABCA3-206ENST00000569062 TSKSQ9UJT2 592 aa24.99■■□□□ 1.59
ABCA3-206ENST00000569062 SSC5DA1L4H1 1573 aa24.98■■□□□ 1.59
ABCA3-206ENST00000569062 KIF23Q02241 960 aaPredicted RBP24.98■■□□□ 1.59
ABCA3-206ENST00000569062 TNS4Q8IZW8 715 aa24.98■■□□□ 1.59
ABCA3-206ENST00000569062 PPP2R3BQ9Y5P8 575 aa24.98■■□□□ 1.59
ABCA3-206ENST00000569062 ZBTB7BO15156 539 aaPredicted RBP24.97■■□□□ 1.59
ABCA3-206ENST00000569062 HDLBPQ00341 1268 aaKnown RBP24.97■■□□□ 1.59
ABCA3-206ENST00000569062 WDR66Q8TBY9 1149 aa24.97■■□□□ 1.59
ABCA3-206ENST00000569062 A0A1B0GUL7 405 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 RASA3Q14644 834 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 CCDC102BQ68D86 513 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 PANK1Q8TE04 598 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 TEKT1Q969V4 418 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 GNL3LQ9NVN8 582 aaKnown RBP24.96■■□□□ 1.59
ABCA3-206ENST00000569062 SUGT1Q9Y2Z0 365 aa24.96■■□□□ 1.59
ABCA3-206ENST00000569062 AKAP11Q9UKA4 1901 aa24.95■■□□□ 1.58
ABCA3-206ENST00000569062 NBPF12Q5TAG4 269 aaPredicted RBP24.95■■□□□ 1.58
ABCA3-206ENST00000569062 ARMC9Q7Z3E5 817 aa24.95■■□□□ 1.58
ABCA3-206ENST00000569062 ANGEL1Q9UNK9 670 aaKnown RBP24.95■■□□□ 1.58
ABCA3-206ENST00000569062 AKAP2Q9Y2D5 859 aa24.95■■□□□ 1.58
ABCA3-206ENST00000569062 ATP8B2P98198 1209 aa24.94■■□□□ 1.58
ABCA3-206ENST00000569062 G3BP1Q13283 466 aaKnown RBP eCLIP24.94■■□□□ 1.58
ABCA3-206ENST00000569062 POLA2Q14181 598 aa24.94■■□□□ 1.58
ABCA3-206ENST00000569062 XAGE2Q96GT9 111 aa24.94■■□□□ 1.58
ABCA3-206ENST00000569062 MRIQ9BWK5 157 aa24.94■■□□□ 1.58
ABCA3-206ENST00000569062 DENND2AQ9ULE3 1009 aa24.94■■□□□ 1.58
ABCA3-206ENST00000569062 MAST3O60307 1309 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 TCP10L2B9ZVM9 353 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 PRDX5P30044 214 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 SSH3Q8TE77 659 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 ZDHHC15Q96MV8 337 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 CSRNP1Q96S65 589 aa24.93■■□□□ 1.58
ABCA3-206ENST00000569062 SEMA3EO15041 775 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 CA12O43570 354 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 CACNB3P54284 484 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 TNFAIP1Q13829 316 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 SUPT20HL1Q3ZLR7 823 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 LDLRAD1Q5T700 205 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 APOBEC3HQ6NTF7 200 aaKnown RBP24.92■■□□□ 1.58
ABCA3-206ENST00000569062 NEUROD6Q96NK8 337 aa24.92■■□□□ 1.58
ABCA3-206ENST00000569062 HHIPL2Q6UWX4 724 aa24.91■■□□□ 1.58
ABCA3-206ENST00000569062 CDAN1Q8IWY9 1227 aa24.91■■□□□ 1.58
ABCA3-206ENST00000569062 SALL1Q9NSC2 1324 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 RASGRF1Q13972 1273 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 DIXDC1Q155Q3 683 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 MAP3K11Q16584 847 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 TEPSINQ96N21 525 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 TMEM39BQ9GZU3 492 aa24.9■■□□□ 1.58
ABCA3-206ENST00000569062 OTOFQ9HC10 1997 aa24.89■■□□□ 1.58
ABCA3-206ENST00000569062 ZBTB22O15209 634 aa24.89■■□□□ 1.58
ABCA3-206ENST00000569062 PPP1R12BO60237 982 aaPredicted RBP24.89■■□□□ 1.58
ABCA3-206ENST00000569062 LDHBP07195 334 aaKnown RBP24.89■■□□□ 1.58
ABCA3-206ENST00000569062 MKRN3Q13064 507 aaKnown RBP24.89■■□□□ 1.58
ABCA3-206ENST00000569062 MVPQ14764 893 aaKnown RBP24.89■■□□□ 1.58
ABCA3-206ENST00000569062 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.89■■□□□ 1.58
ABCA3-206ENST00000569062 RCAN3Q9UKA8 241 aa24.89■■□□□ 1.58
ABCA3-206ENST00000569062 CASP8AP2Q9UKL3 1982 aa24.89■■□□□ 1.57
ABCA3-206ENST00000569062 MYH2Q9UKX2 1941 aa24.88■■□□□ 1.57
ABCA3-206ENST00000569062 USP2O75604 605 aaPredicted RBP24.88■■□□□ 1.57
ABCA3-206ENST00000569062 TNNI2P48788 182 aa24.88■■□□□ 1.57
ABCA3-206ENST00000569062 RNF186Q9NXI6 227 aa24.88■■□□□ 1.57
ABCA3-206ENST00000569062 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
ABCA3-206ENST00000569062 CLMNQ96JQ2 1002 aa24.87■■□□□ 1.57
ABCA3-206ENST00000569062 DAGLAQ9Y4D2 1042 aa24.87■■□□□ 1.57
ABCA3-206ENST00000569062 TRPA1O75762 1119 aa24.86■■□□□ 1.57
ABCA3-206ENST00000569062 OS9Q13438 667 aaPredicted RBP24.86■■□□□ 1.57
ABCA3-206ENST00000569062 CEP85Q6P2H3 762 aa24.86■■□□□ 1.57
ABCA3-206ENST00000569062 PDS5AQ29RF7 1337 aaKnown RBP24.86■■□□□ 1.57
ABCA3-206ENST00000569062 MS4A1P11836 297 aa24.85■■□□□ 1.57
ABCA3-206ENST00000569062 GORABQ5T7V8 394 aa24.85■■□□□ 1.57
ABCA3-206ENST00000569062 REM2Q8IYK8 340 aaPredicted RBP24.85■■□□□ 1.57
ABCA3-206ENST00000569062 SAGE1Q9NXZ1 904 aa24.85■■□□□ 1.57
ABCA3-206ENST00000569062 TMOD2Q9NZR1 351 aa24.85■■□□□ 1.57
ABCA3-206ENST00000569062 IREB2P48200 963 aaKnown RBP24.84■■□□□ 1.57
ABCA3-206ENST00000569062 SPRYD7Q5W111 196 aa24.84■■□□□ 1.57
ABCA3-206ENST00000569062 ZGPATQ8N5A5 531 aaKnown RBP24.84■■□□□ 1.57
ABCA3-206ENST00000569062 SLC10A4Q96EP9 437 aa24.84■■□□□ 1.57
ABCA3-206ENST00000569062 ABCF2Q9UG63 623 aa24.84■■□□□ 1.57
ABCA3-206ENST00000569062 COG6Q9Y2V7 657 aa24.84■■□□□ 1.57
ABCA3-206ENST00000569062 NOP58Q9Y2X3 529 aaKnown RBP24.84■■□□□ 1.57
ABCA3-206ENST00000569062 TNNI3KQ59H18 835 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 CDC42EP5Q6NZY7 148 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 PI16Q6UXB8 463 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 FAM83AQ86UY5 434 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 HMG20BQ9P0W2 317 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 FPGT-TNNI3KV9GXZ4 949 aa24.83■■□□□ 1.57
ABCA3-206ENST00000569062 LAMB1P07942 1786 aa24.82■■□□□ 1.56
ABCA3-206ENST00000569062 CAPN15O75808 1086 aa24.82■■□□□ 1.56
ABCA3-206ENST00000569062 ARID4AP29374 1257 aaPredicted RBP24.82■■□□□ 1.56
ABCA3-206ENST00000569062 FKBP1CQ5VVH2 108 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms