RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 SLKQ9H2G2 1235 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-221ENST00000567935 PALD1Q9ULE6 856 aa17.5■□□□□ 0.39
COMMD4-221ENST00000567935 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 NPR1P16066 1061 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 ARID4AP29374 1257 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-221ENST00000567935 ADORA1P30542 326 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 ZSCAN25Q6NSZ9 544 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 DDX46Q7L014 1031 aaKnown RBP17.49■□□□□ 0.39
COMMD4-221ENST00000567935 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
COMMD4-221ENST00000567935 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-221ENST00000567935 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 DDIT3P35638 169 aa17.48■□□□□ 0.39
COMMD4-221ENST00000567935 KCNJ4P48050 445 aa17.48■□□□□ 0.39
COMMD4-221ENST00000567935 EIF6P56537 245 aaKnown RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
COMMD4-221ENST00000567935 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
COMMD4-221ENST00000567935 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 GLIS2Q9BZE0 524 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 RBM8AQ9Y5S9 174 aaKnown RBP17.48■□□□□ 0.39
COMMD4-221ENST00000567935 RNF113AO15541 343 aaKnown RBP17.47■□□□□ 0.39
COMMD4-221ENST00000567935 TAF5LO75529 589 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 PSMA5P28066 241 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 PTH1RQ03431 593 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 NOGQ13253 232 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 KRT32Q14532 448 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 ZNF408Q9H9D4 720 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 SEC31BQ9NQW1 1179 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 MYH7P12883 1935 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
COMMD4-221ENST00000567935 DSCC1Q9BVC3 393 aa17.46■□□□□ 0.39
COMMD4-221ENST00000567935 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-221ENST00000567935 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
COMMD4-221ENST00000567935 CREB3L3Q68CJ9 461 aa17.45■□□□□ 0.38
COMMD4-221ENST00000567935 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
COMMD4-221ENST00000567935 ZBTB22O15209 634 aa17.44■□□□□ 0.38
COMMD4-221ENST00000567935 CHRNDQ07001 517 aa17.44■□□□□ 0.38
COMMD4-221ENST00000567935 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-221ENST00000567935 INTS4Q96HW7 963 aaKnown RBP17.44■□□□□ 0.38
COMMD4-221ENST00000567935 PSMD1Q99460 953 aa17.44■□□□□ 0.38
COMMD4-221ENST00000567935 ANKRD2Q9GZV1 360 aa17.44■□□□□ 0.38
COMMD4-221ENST00000567935 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
COMMD4-221ENST00000567935 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 SLC27A2O14975 620 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 MCAMP43121 646 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 ZAP70P43403 619 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 CUL4AQ13619 759 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 NFKBIBQ15653 356 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 VPS53Q5VIR6 699 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 CTU1Q7Z7A3 348 aaKnown RBP17.43■□□□□ 0.38
COMMD4-221ENST00000567935 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 APPBP2Q92624 585 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 SAGE1Q9NXZ1 904 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 CYP46A1Q9Y6A2 500 aa17.43■□□□□ 0.38
COMMD4-221ENST00000567935 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-221ENST00000567935 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
COMMD4-221ENST00000567935 TMX3Q96JJ7 454 aa17.42■□□□□ 0.38
COMMD4-221ENST00000567935 TTC14Q96N46 770 aa17.42■□□□□ 0.38
COMMD4-221ENST00000567935 ADARB2Q9NS39 739 aaKnown RBP17.42■□□□□ 0.38
COMMD4-221ENST00000567935 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
COMMD4-221ENST00000567935 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
COMMD4-221ENST00000567935 FAM155AB1AL88 458 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-221ENST00000567935 TRPA1O75762 1119 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 PHKA1P46020 1223 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 NUCB2P80303 420 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 SCARF1Q14162 830 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 NBR1Q14596 966 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 UBE3CQ15386 1083 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 SPRYD3Q8NCJ5 442 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-221ENST00000567935 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
COMMD4-221ENST00000567935 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
COMMD4-221ENST00000567935 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-221ENST00000567935 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
COMMD4-221ENST00000567935 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
COMMD4-221ENST00000567935 FXR1P51114 621 aaKnown RBP eCLIP17.4■□□□□ 0.38
COMMD4-221ENST00000567935 HUNKP57058 714 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 RUFY3Q7L099 469 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 HELBQ8NG08 1087 aaPredicted RBP17.4■□□□□ 0.38
COMMD4-221ENST00000567935 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 MAST3O60307 1309 aa17.4■□□□□ 0.38
COMMD4-221ENST00000567935 SEMA3EO15041 775 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 IGSF3O75054 1194 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
COMMD4-221ENST00000567935 ADD2P35612 726 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 DLK2Q6UY11 383 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 LARGE2Q8N3Y3 721 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms