RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 PHAXQ9H814 394 aaKnown RBP21.57■■□□□ 1.04
CLK3-217ENST00000566126 CSADQ9Y600 493 aa21.57■■□□□ 1.04
CLK3-217ENST00000566126 SNCAIPQ9Y6H5 919 aa21.57■■□□□ 1.04
CLK3-217ENST00000566126 LAMA2P24043 3122 aaKnown RBP21.57■■□□□ 1.04
CLK3-217ENST00000566126 ADGRA2Q96PE1 1338 aa21.56■■□□□ 1.04
CLK3-217ENST00000566126 PRKCZQ05513 592 aa21.56■■□□□ 1.04
CLK3-217ENST00000566126 TNFAIP1Q13829 316 aa21.56■■□□□ 1.04
CLK3-217ENST00000566126 SPDYE2Q495Y8 402 aa21.56■■□□□ 1.04
CLK3-217ENST00000566126 ZNF70Q9UC06 446 aaPredicted RBP21.56■■□□□ 1.04
CLK3-217ENST00000566126 IRF6O14896 467 aa21.55■■□□□ 1.04
CLK3-217ENST00000566126 ZMYND8Q9ULU4 1186 aaPredicted RBP21.55■■□□□ 1.04
CLK3-217ENST00000566126 PRUNE2Q8WUY3 3088 aa21.55■■□□□ 1.04
CLK3-217ENST00000566126 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
CLK3-217ENST00000566126 SNAPC2Q13487 334 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 TDHQ8IZJ6 230 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 SLAIN1Q8ND83 568 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 PAWRQ96IZ0 340 aaKnown RBP21.54■■□□□ 1.04
CLK3-217ENST00000566126 TMEM39BQ9GZU3 492 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 ANKRD2Q9GZV1 360 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 RPTORQ8N122 1335 aa21.54■■□□□ 1.04
CLK3-217ENST00000566126 TFRCP02786 760 aaKnown RBP21.53■■□□□ 1.04
CLK3-217ENST00000566126 TMPOP42166 694 aaKnown RBP21.53■■□□□ 1.04
CLK3-217ENST00000566126 FKBP1AP62942 108 aaKnown RBP21.53■■□□□ 1.04
CLK3-217ENST00000566126 ERO1BQ86YB8 467 aa21.53■■□□□ 1.04
CLK3-217ENST00000566126 C7orf61Q8IZ16 206 aa21.53■■□□□ 1.04
CLK3-217ENST00000566126 TDRD3Q9H7E2 651 aaKnown RBP21.53■■□□□ 1.04
CLK3-217ENST00000566126 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
CLK3-217ENST00000566126 SNAP23O00161 211 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
CLK3-217ENST00000566126 LMOD3Q0VAK6 560 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 DIS3LQ8TF46 1054 aaKnown RBP21.52■■□□□ 1.04
CLK3-217ENST00000566126 GUCD1Q96NT3 240 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 DEFB118Q96PH6 123 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 GABRQQ9UN88 632 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 JAG2Q9Y219 1238 aa21.52■■□□□ 1.04
CLK3-217ENST00000566126 IL1R1P14778 569 aa21.51■■□□□ 1.03
CLK3-217ENST00000566126 MAGEA10P43363 369 aaPredicted RBP21.51■■□□□ 1.03
CLK3-217ENST00000566126 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
CLK3-217ENST00000566126 METTL22Q9BUU2 404 aaPredicted RBP21.51■■□□□ 1.03
CLK3-217ENST00000566126 CRISPLD2Q9H0B8 497 aa21.51■■□□□ 1.03
CLK3-217ENST00000566126 TTC28Q96AY4 2481 aa21.51■■□□□ 1.03
CLK3-217ENST00000566126 A0A1B0GUL6 1792 aa21.51■■□□□ 1.03
CLK3-217ENST00000566126 MUC3AQ02505 3323 aa21.5■■□□□ 1.03
CLK3-217ENST00000566126 TCP10L2B9ZVM9 353 aa21.5■■□□□ 1.03
CLK3-217ENST00000566126 PPIL2Q13356 520 aa21.5■■□□□ 1.03
CLK3-217ENST00000566126 ZKSCAN4Q969J2 545 aaPredicted RBP21.5■■□□□ 1.03
CLK3-217ENST00000566126 CAPN2P17655 700 aa21.49■■□□□ 1.03
CLK3-217ENST00000566126 KCNJ4P48050 445 aa21.49■■□□□ 1.03
CLK3-217ENST00000566126 CHRNDQ07001 517 aa21.49■■□□□ 1.03
CLK3-217ENST00000566126 C15orf52Q6ZUT6 534 aaKnown RBP21.49■■□□□ 1.03
CLK3-217ENST00000566126 ANKRD23Q86SG2 305 aa21.49■■□□□ 1.03
CLK3-217ENST00000566126 PAK6Q9NQU5 681 aaPredicted RBP21.49■■□□□ 1.03
CLK3-217ENST00000566126 PDHXO00330 501 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 ADCY3O60266 1144 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 INHAP05111 366 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 ELNP15502 786 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 SYN1P17600 705 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 NECAB2Q7Z6G3 386 aa21.48■■□□□ 1.03
CLK3-217ENST00000566126 IGKV5-2P06315 115 aa21.47■■□□□ 1.03
CLK3-217ENST00000566126 FCGRTP55899 365 aa21.47■■□□□ 1.03
CLK3-217ENST00000566126 WRNIP1Q96S55 665 aa21.47■■□□□ 1.03
CLK3-217ENST00000566126 POTEB2H3BUK9 544 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 BCRP11274 1271 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 COL9A1P20849 921 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 ITGA6P23229 1130 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
CLK3-217ENST00000566126 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
CLK3-217ENST00000566126 MPHOSPH8Q99549 860 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 SERPINA10Q9UK55 444 aa21.46■■□□□ 1.03
CLK3-217ENST00000566126 TAF5LO75529 589 aa21.45■■□□□ 1.02
CLK3-217ENST00000566126 MOGSQ13724 837 aa21.45■■□□□ 1.02
CLK3-217ENST00000566126 PXYLP1Q8TE99 480 aa21.45■■□□□ 1.02
CLK3-217ENST00000566126 UBE2OQ9C0C9 1292 aaKnown RBP21.45■■□□□ 1.02
CLK3-217ENST00000566126 TNNI2P48788 182 aa21.44■■□□□ 1.02
CLK3-217ENST00000566126 FLT3LGP49771 235 aa21.44■■□□□ 1.02
CLK3-217ENST00000566126 PPATQ06203 517 aa21.44■■□□□ 1.02
CLK3-217ENST00000566126 TRIM26Q12899 539 aaPredicted RBP21.44■■□□□ 1.02
CLK3-217ENST00000566126 FAM109BQ6ICB4 259 aaPredicted RBP21.44■■□□□ 1.02
CLK3-217ENST00000566126 ZNF804AQ7Z570 1209 aa21.44■■□□□ 1.02
CLK3-217ENST00000566126 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
CLK3-217ENST00000566126 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
CLK3-217ENST00000566126 TTF2Q9UNY4 1162 aaKnown RBP21.43■■□□□ 1.02
CLK3-217ENST00000566126 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
CLK3-217ENST00000566126 DOCK3Q8IZD9 2030 aa21.43■■□□□ 1.02
CLK3-217ENST00000566126 DDX60LQ5H9U9 1706 aaKnown RBP21.42■■□□□ 1.02
CLK3-217ENST00000566126 FAM205AQ6ZU69 1335 aa21.42■■□□□ 1.02
CLK3-217ENST00000566126 FAM161BQ96MY7 647 aa21.42■■□□□ 1.02
CLK3-217ENST00000566126 COL2A1P02458 1487 aaPredicted RBP21.41■■□□□ 1.02
CLK3-217ENST00000566126 RAPGEFL1Q9UHV5 662 aa21.41■■□□□ 1.02
CLK3-217ENST00000566126 KCNH4Q9UQ05 1017 aa21.41■■□□□ 1.02
CLK3-217ENST00000566126 H7C1W4 665 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 CYP2C8P10632 490 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 CACNB3P54284 484 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 IRF5Q13568 498 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 MFSD14BQ5SR56 506 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
CLK3-217ENST00000566126 PARK7Q99497 189 aaKnown RBP21.4■■□□□ 1.02
CLK3-217ENST00000566126 INPP5BP32019 993 aa21.39■■□□□ 1.01
CLK3-217ENST00000566126 CRKP46108 304 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms