RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
RNF40-208ENST00000565995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
RNF40-208ENST00000565995 ZFYVE28Q9HCC9 887 aa16.22■□□□□ 0.19
RNF40-208ENST00000565995 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
RNF40-208ENST00000565995 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 FAM84BQ96KN1 310 aaPredicted RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 TDRD3Q9H7E2 651 aaKnown RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 TTF2Q9UNY4 1162 aaKnown RBP16.21■□□□□ 0.19
RNF40-208ENST00000565995 PTPRFP10586 1907 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 GNRH1P01148 92 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
RNF40-208ENST00000565995 VGLL4Q14135 290 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
RNF40-208ENST00000565995 CDAN1Q8IWY9 1227 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 MRIQ9BWK5 157 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 JAG2Q9Y219 1238 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 PTCH2Q9Y6C5 1203 aa16.2■□□□□ 0.18
RNF40-208ENST00000565995 RANBP2P49792 3224 aaKnown RBP16.2■□□□□ 0.18
RNF40-208ENST00000565995 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 GRM8O00222 908 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 TNNI2P48788 182 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 CCL15Q16663 113 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 SLC9C1Q4G0N8 1177 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 DOCK3Q8IZD9 2030 aa16.19■□□□□ 0.18
RNF40-208ENST00000565995 SPDYE5A6NIY4 337 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 F6X3S4 739 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 TLR2O60603 784 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 CRKP46108 304 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 FBXO33Q7Z6M2 555 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 WDR63Q8IWG1 891 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 TMEM39BQ9GZU3 492 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 CHMP3Q9Y3E7 222 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
RNF40-208ENST00000565995 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
RNF40-208ENST00000565995 PLIN1O60240 522 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 GYG1P46976 350 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 PRMT2P55345 433 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 FAM83AQ86UY5 434 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 ERO1BQ86YB8 467 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
RNF40-208ENST00000565995 CSADQ9Y600 493 aa16.17■□□□□ 0.18
RNF40-208ENST00000565995 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 CETPP11597 493 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 LACTBP83111 547 aaPredicted RBP16.16■□□□□ 0.18
RNF40-208ENST00000565995 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 TAF7LQ5H9L4 462 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 SNCAIPQ9Y6H5 919 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 PHIPQ8WWQ0 1821 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 MROH5Q6ZUA9 1318 aa16.16■□□□□ 0.18
RNF40-208ENST00000565995 MYH2Q9UKX2 1941 aa16.15■□□□□ 0.18
RNF40-208ENST00000565995 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
RNF40-208ENST00000565995 EXOSC9Q06265 439 aaKnown RBP16.15■□□□□ 0.18
RNF40-208ENST00000565995 GRIK5Q16478 980 aa16.15■□□□□ 0.18
RNF40-208ENST00000565995 TBC1D22AQ8WUA7 517 aa16.15■□□□□ 0.18
RNF40-208ENST00000565995 UTYO14607 1347 aa16.15■□□□□ 0.18
RNF40-208ENST00000565995 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
RNF40-208ENST00000565995 RPAP1Q9BWH6 1393 aaPredicted RBP16.14■□□□□ 0.17
RNF40-208ENST00000565995 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 PPIL2Q13356 520 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 KIF22Q14807 665 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 C17orf99Q6UX52 265 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 HOOK2Q96ED9 719 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
RNF40-208ENST00000565995 C9orf78Q9NZ63 289 aaPredicted RBP16.14■□□□□ 0.17
RNF40-208ENST00000565995 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.17
RNF40-208ENST00000565995 IRF6O14896 467 aa16.13■□□□□ 0.17
RNF40-208ENST00000565995 SNAPC2Q13487 334 aa16.13■□□□□ 0.17
RNF40-208ENST00000565995 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
RNF40-208ENST00000565995 ARHGAP39Q9C0H5 1083 aa16.13■□□□□ 0.17
RNF40-208ENST00000565995 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
RNF40-208ENST00000565995 H0YGN5 161 aa16.12■□□□□ 0.17
RNF40-208ENST00000565995 PPATQ06203 517 aa16.12■□□□□ 0.17
RNF40-208ENST00000565995 RABL6Q3YEC7 729 aaPredicted RBP16.12■□□□□ 0.17
RNF40-208ENST00000565995 APOBEC3HQ6NTF7 200 aaKnown RBP16.12■□□□□ 0.17
RNF40-208ENST00000565995 HHIPL2Q6UWX4 724 aa16.12■□□□□ 0.17
RNF40-208ENST00000565995 VGLL2Q8N8G2 317 aa16.12■□□□□ 0.17
RNF40-208ENST00000565995 KIF16BQ96L93 1317 aa16.12■□□□□ 0.17
RNF40-208ENST00000565995 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 SH3TC2Q8TF17 1288 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 ZKSCAN4Q969J2 545 aaPredicted RBP16.11■□□□□ 0.17
RNF40-208ENST00000565995 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 SRCIN1Q9C0H9 1055 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 ZNF112Q9UJU3 913 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
RNF40-208ENST00000565995 PDE8BO95263 885 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 CTGFP29279 349 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms