RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 POLR2AP24928 1970 aaKnown RBP18.54■□□□□ 0.56
KNOP1-203ENST00000565844 SHTN1A0MZ66 631 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 USP17L3A6NCW0 530 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 USP17L4A6NCW7 530 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 CYP2E1P05181 493 aaPredicted RBP18.54■□□□□ 0.56
KNOP1-203ENST00000565844 GMPSP49915 693 aaPredicted RBP18.54■□□□□ 0.56
KNOP1-203ENST00000565844 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 USP17L1Q7RTZ2 530 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 WDR66Q8TBY9 1149 aa18.54■□□□□ 0.56
KNOP1-203ENST00000565844 HSPA1AP0DMV8 641 aaKnown RBP18.53■□□□□ 0.56
KNOP1-203ENST00000565844 HSPA1BP0DMV9 641 aaKnown RBP18.53■□□□□ 0.56
KNOP1-203ENST00000565844 TTF1Q15361 905 aaPredicted RBP18.53■□□□□ 0.56
KNOP1-203ENST00000565844 MFSD14BQ5SR56 506 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 STRIP1Q5VSL9 837 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 ANTXR1Q9H6X2 564 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 GPRC5DQ9NZD1 345 aa18.53■□□□□ 0.56
KNOP1-203ENST00000565844 TMEM88BA6NKF7 163 aa18.52■□□□□ 0.55
KNOP1-203ENST00000565844 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.55
KNOP1-203ENST00000565844 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.55
KNOP1-203ENST00000565844 RILPL2Q969X0 211 aa18.52■□□□□ 0.55
KNOP1-203ENST00000565844 PIH1D3Q9NQM4 214 aaKnown RBP18.52■□□□□ 0.55
KNOP1-203ENST00000565844 ABCF2Q9UG63 623 aa18.52■□□□□ 0.55
KNOP1-203ENST00000565844 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
KNOP1-203ENST00000565844 TRAF5O00463 557 aa18.51■□□□□ 0.55
KNOP1-203ENST00000565844 DACT2Q5SW24 774 aa18.51■□□□□ 0.55
KNOP1-203ENST00000565844 ZGPATQ8N5A5 531 aaKnown RBP18.51■□□□□ 0.55
KNOP1-203ENST00000565844 EVI5LQ96CN4 794 aa18.51■□□□□ 0.55
KNOP1-203ENST00000565844 MXD3Q9BW11 206 aa18.51■□□□□ 0.55
KNOP1-203ENST00000565844 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
KNOP1-203ENST00000565844 PSMD14O00487 310 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 SDSP20132 328 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 TNIP1Q15025 636 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 COL13A1Q5TAT6 717 aaPredicted RBP18.5■□□□□ 0.55
KNOP1-203ENST00000565844 FSD1Q9BTV5 496 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 LRP2BPQ9P2M1 347 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 CNTNAP1P78357 1384 aa18.5■□□□□ 0.55
KNOP1-203ENST00000565844 IDH1O75874 414 aaKnown RBP18.49■□□□□ 0.55
KNOP1-203ENST00000565844 SPTY2D1Q68D10 685 aaPredicted RBP18.49■□□□□ 0.55
KNOP1-203ENST00000565844 CERS5Q8N5B7 392 aa18.49■□□□□ 0.55
KNOP1-203ENST00000565844 KBTBD3Q8NAB2 608 aa18.49■□□□□ 0.55
KNOP1-203ENST00000565844 ADARB2Q9NS39 739 aaKnown RBP18.49■□□□□ 0.55
KNOP1-203ENST00000565844 LDHBP07195 334 aaKnown RBP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 PRDX5P30044 214 aa18.48■□□□□ 0.55
KNOP1-203ENST00000565844 FKBP1AP62942 108 aaKnown RBP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 RSBN1LQ6PCB5 846 aaPredicted RBP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 TRPM4Q8TD43 1214 aa18.48■□□□□ 0.55
KNOP1-203ENST00000565844 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 RAI14Q9P0K7 980 aa18.48■□□□□ 0.55
KNOP1-203ENST00000565844 ABT1Q9ULW3 272 aaKnown RBP18.48■□□□□ 0.55
KNOP1-203ENST00000565844 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
KNOP1-203ENST00000565844 VIL1P09327 827 aaKnown RBP18.47■□□□□ 0.55
KNOP1-203ENST00000565844 VEGFBP49765 207 aa18.47■□□□□ 0.55
KNOP1-203ENST00000565844 MAP3K12Q12852 859 aa18.47■□□□□ 0.55
KNOP1-203ENST00000565844 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
KNOP1-203ENST00000565844 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
KNOP1-203ENST00000565844 HIRAP54198 1017 aaPredicted RBP18.46■□□□□ 0.55
KNOP1-203ENST00000565844 GRIK5Q16478 980 aa18.46■□□□□ 0.55
KNOP1-203ENST00000565844 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
KNOP1-203ENST00000565844 MICALL2Q8IY33 904 aa18.46■□□□□ 0.55
KNOP1-203ENST00000565844 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
KNOP1-203ENST00000565844 SUGT1Q9Y2Z0 365 aa18.46■□□□□ 0.55
KNOP1-203ENST00000565844 F8W031 263 aaPredicted RBP18.45■□□□□ 0.54
KNOP1-203ENST00000565844 GRM1Q13255 1194 aa18.45■□□□□ 0.54
KNOP1-203ENST00000565844 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
KNOP1-203ENST00000565844 GLIS2Q9BZE0 524 aaPredicted RBP18.45■□□□□ 0.54
KNOP1-203ENST00000565844 RFX7Q2KHR2 1363 aa18.45■□□□□ 0.54
KNOP1-203ENST00000565844 MAST3O60307 1309 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 MECOMQ03112 1051 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
KNOP1-203ENST00000565844 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 PAXIP1Q6ZW49 1069 aaPredicted RBP18.44■□□□□ 0.54
KNOP1-203ENST00000565844 SAMD7Q7Z3H4 446 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 MAGEB6Q8N7X4 407 aa18.44■□□□□ 0.54
KNOP1-203ENST00000565844 TTF2Q9UNY4 1162 aaKnown RBP18.44■□□□□ 0.54
KNOP1-203ENST00000565844 EGFRP00533 1210 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 PDE6AP16499 860 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 TBC1D10BQ4KMP7 808 aaPredicted RBP18.43■□□□□ 0.54
KNOP1-203ENST00000565844 RBM26Q5T8P6 1007 aaKnown RBP18.43■□□□□ 0.54
KNOP1-203ENST00000565844 DLK2Q6UY11 383 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
KNOP1-203ENST00000565844 GMLQ99445 158 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 ZNF408Q9H9D4 720 aa18.43■□□□□ 0.54
KNOP1-203ENST00000565844 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
KNOP1-203ENST00000565844 IGSF3O75054 1194 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
KNOP1-203ENST00000565844 RPS12P25398 132 aaKnown RBP18.42■□□□□ 0.54
KNOP1-203ENST00000565844 ADD2P35612 726 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 DEFB115Q30KQ5 88 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
KNOP1-203ENST00000565844 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 DIAPH3Q9NSV4 1193 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 ZNF532Q9HCE3 1301 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 H7C1D1 291 aa18.42■□□□□ 0.54
KNOP1-203ENST00000565844 CHGBP05060 677 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms