RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 TTF1Q15361 905 aaPredicted RBP16.95■□□□□ 0.3
SPG7-203ENST00000561702 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
SPG7-203ENST00000561702 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
SPG7-203ENST00000561702 GDPD2Q9HCC8 539 aa16.95■□□□□ 0.3
SPG7-203ENST00000561702 MAST3O60307 1309 aa16.95■□□□□ 0.3
SPG7-203ENST00000561702 COL11A2P13942 1736 aaPredicted RBP16.94■□□□□ 0.3
SPG7-203ENST00000561702 M0R2C6 588 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
SPG7-203ENST00000561702 KLRK1P26718 216 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 FOXD4L6Q3SYB3 417 aaPredicted RBP16.94■□□□□ 0.3
SPG7-203ENST00000561702 FOXD4L3Q6VB84 417 aaPredicted RBP16.94■□□□□ 0.3
SPG7-203ENST00000561702 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 CHMP4CQ96CF2 233 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
SPG7-203ENST00000561702 BRIP1Q9BX63 1249 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
SPG7-203ENST00000561702 ELP1O95163 1332 aa16.93■□□□□ 0.3
SPG7-203ENST00000561702 COL1A1P02452 1464 aaPredicted RBP16.93■□□□□ 0.3
SPG7-203ENST00000561702 KRT85P78386 507 aa16.93■□□□□ 0.3
SPG7-203ENST00000561702 TOB2Q14106 344 aaPredicted RBP16.93■□□□□ 0.3
SPG7-203ENST00000561702 DSCC1Q9BVC3 393 aa16.93■□□□□ 0.3
SPG7-203ENST00000561702 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
SPG7-203ENST00000561702 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
SPG7-203ENST00000561702 VPS37CA5D8V6 355 aaPredicted RBP16.92■□□□□ 0.3
SPG7-203ENST00000561702 ADD2P35612 726 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 APPBP2Q92624 585 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.34e-6■■■□□ 16.3
SPG7-203ENST00000561702 CCDC39Q9UFE4 941 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 NOL7Q9UMY1 257 aaKnown RBP16.92■□□□□ 0.3
SPG7-203ENST00000561702 IQSEC3Q9UPP2 1182 aaPredicted RBP16.92■□□□□ 0.3
SPG7-203ENST00000561702 IDH1O75874 414 aaKnown RBP16.92■□□□□ 0.3
SPG7-203ENST00000561702 CAVIN4Q5BKX8 364 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 NECAB1Q8N987 351 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
SPG7-203ENST00000561702 FIBPO43427 364 aa16.91■□□□□ 0.3
SPG7-203ENST00000561702 WASHC4Q2M389 1173 aa16.91■□□□□ 0.3
SPG7-203ENST00000561702 ZSCAN25Q6NSZ9 544 aa16.91■□□□□ 0.3
SPG7-203ENST00000561702 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
SPG7-203ENST00000561702 GNL3LQ9NVN8 582 aaKnown RBP16.91■□□□□ 0.3
SPG7-203ENST00000561702 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
SPG7-203ENST00000561702 SLC9C2Q5TAH2 1124 aa16.91■□□□□ 0.3
SPG7-203ENST00000561702 PUS7LQ9H0K6 701 aaKnown RBP16.91■□□□□ 0.3
SPG7-203ENST00000561702 XDHP47989 1333 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 BBOX1O75936 387 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 PDE6AP16499 860 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 GPSM2P81274 684 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 TXNRD3Q86VQ6 643 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 GTF3C6Q969F1 213 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
SPG7-203ENST00000561702 ANKIB1Q9P2G1 1089 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 LEMD3Q9Y2U8 911 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
SPG7-203ENST00000561702 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 SRGNP10124 158 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 VPS37DQ86XT2 251 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 ZNF532Q9HCE3 1301 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 CYP21A2P08686 494 aa16.89■□□□□ 0.29
SPG7-203ENST00000561702 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
SPG7-203ENST00000561702 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
SPG7-203ENST00000561702 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
SPG7-203ENST00000561702 HIBADHP31937 336 aaKnown RBP16.88■□□□□ 0.29
SPG7-203ENST00000561702 PDE6BP35913 854 aa16.88■□□□□ 0.29
SPG7-203ENST00000561702 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
SPG7-203ENST00000561702 LAMA4Q16363 1823 aa16.88■□□□□ 0.29
SPG7-203ENST00000561702 FOXP2O15409 715 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 NPR1P16066 1061 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
SPG7-203ENST00000561702 RNF214Q8ND24 703 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 ZSCAN16Q9H4T2 348 aaPredicted RBP16.87■□□□□ 0.29
SPG7-203ENST00000561702 SEMA3EO15041 775 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 GPAA1O43292 621 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 Q6ZUG5 572 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 MAGEB6Q8N7X4 407 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 NAP1L5Q96NT1 182 aaPredicted RBP16.87■□□□□ 0.29
SPG7-203ENST00000561702 GPR101Q96P66 508 aaPredicted RBP16.87■□□□□ 0.29
SPG7-203ENST00000561702 ZKSCAN5Q9Y2L8 839 aa16.87■□□□□ 0.29
SPG7-203ENST00000561702 PPEF1O14829 653 aaPredicted RBP16.86■□□□□ 0.29
SPG7-203ENST00000561702 C15orf52Q6ZUT6 534 aaKnown RBP16.86■□□□□ 0.29
SPG7-203ENST00000561702 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 PDS5AQ29RF7 1337 aaKnown RBP16.86■□□□□ 0.29
SPG7-203ENST00000561702 ZBTB22O15209 634 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
SPG7-203ENST00000561702 FGD1P98174 961 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
SPG7-203ENST00000561702 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 AGXT2Q9BYV1 514 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
SPG7-203ENST00000561702 PFKFB2O60825 505 aa16.85■□□□□ 0.29
SPG7-203ENST00000561702 UFL1O94874 794 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms