RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 PLIN1O60240 522 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 BCAR3O75815 825 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 UBE4AQ14139 1066 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 RASA3Q14644 834 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 NBPF12Q5TAG4 269 aaPredicted RBP13.48□□□□□ -0.25
TPM1-227ENST00000560970 ANKRD13AQ8IZ07 590 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
TPM1-227ENST00000560970 SERPINA10Q9UK55 444 aa13.48□□□□□ -0.25
TPM1-227ENST00000560970 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
TPM1-227ENST00000560970 TTF2Q9UNY4 1162 aaKnown RBP13.48□□□□□ -0.25
TPM1-227ENST00000560970 RPAP1Q9BWH6 1393 aaPredicted RBP13.47□□□□□ -0.25
TPM1-227ENST00000560970 UTYO14607 1347 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 GYG1P46976 350 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 ERO1AQ96HE7 468 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
TPM1-227ENST00000560970 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
TPM1-227ENST00000560970 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.25
TPM1-227ENST00000560970 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.25
TPM1-227ENST00000560970 GJA5P36382 358 aa13.46□□□□□ -0.25
TPM1-227ENST00000560970 CRHR2Q13324 411 aa13.46□□□□□ -0.25
TPM1-227ENST00000560970 OTUD7BQ6GQQ9 843 aa13.46□□□□□ -0.25
TPM1-227ENST00000560970 OTOP1Q7RTM1 612 aa13.46□□□□□ -0.25
TPM1-227ENST00000560970 ZNF70Q9UC06 446 aaPredicted RBP13.46□□□□□ -0.25
TPM1-227ENST00000560970 MAST2Q6P0Q8 1798 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 CRKP46108 304 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 TNNI2P48788 182 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 RABL6Q3YEC7 729 aaPredicted RBP13.45□□□□□ -0.26
TPM1-227ENST00000560970 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 KAZALD1Q96I82 304 aa13.45□□□□□ -0.26
TPM1-227ENST00000560970 TDRD3Q9H7E2 651 aaKnown RBP13.45□□□□□ -0.26
TPM1-227ENST00000560970 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 VGLL4Q14135 290 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 DZIP1LQ8IYY4 767 aaKnown RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 TBC1D22AQ8WUA7 517 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 BICC1Q9H694 974 aaKnown RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 ELP3Q9H9T3 547 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
TPM1-227ENST00000560970 KIAA0100Q14667 2235 aaKnown RBP13.44□□□□□ -0.26
TPM1-227ENST00000560970 MAST3O60307 1309 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
TPM1-227ENST00000560970 TCP10L2B9ZVM9 353 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 METTL24Q5JXM2 366 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
TPM1-227ENST00000560970 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
TPM1-227ENST00000560970 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 RIPOR2Q9Y4F9 1068 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 CSADQ9Y600 493 aa13.43□□□□□ -0.26
TPM1-227ENST00000560970 TRIM27P14373 513 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
TPM1-227ENST00000560970 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
TPM1-227ENST00000560970 CAVIN4Q5BKX8 364 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.42□□□□□ -0.26
TPM1-227ENST00000560970 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 TEKT1Q969V4 418 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 API5Q9BZZ5 524 aaKnown RBP13.42□□□□□ -0.26
TPM1-227ENST00000560970 TMEM39BQ9GZU3 492 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 TMOD2Q9NZR1 351 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 PTPN22Q9Y2R2 807 aa13.42□□□□□ -0.26
TPM1-227ENST00000560970 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
TPM1-227ENST00000560970 SP3Q02447 781 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 GRIK5Q16478 980 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 LRRC24Q50LG9 513 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
TPM1-227ENST00000560970 ARMC5Q96C12 935 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 PTPN18Q99952 460 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 EFCC1Q9HA90 598 aa13.41□□□□□ -0.26
TPM1-227ENST00000560970 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
TPM1-227ENST00000560970 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 CCL15-CCL14A0A0B4J2E2 113 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 PDE8BO95263 885 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 GTF2A2P52657 109 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
TPM1-227ENST00000560970 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
TPM1-227ENST00000560970 CCL15Q16663 113 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 BRI3BPQ8WY22 251 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
TPM1-227ENST00000560970 CACNB3P54284 484 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms