RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 CPNE3O75131 537 aaKnown RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 CD68P34810 354 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 ARHGAP4P98171 946 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 SETDB1Q15047 1291 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 GALNT12Q8IXK2 581 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 FTSJ3Q8IY81 847 aaKnown RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 TMTC2Q8N394 836 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 BSNDQ8WZ55 320 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 ALKBH8Q96BT7 664 aaKnown RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 BHLHE41Q9C0J9 482 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 LACRTQ9GZZ8 138 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 SOX17Q9H6I2 414 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 AKTIPQ9H8T0 292 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 BIN2Q9UBW5 565 aaPredicted RBP3.38□□□□□ -1.87
RNF111-211ENST00000560952 DCTN4Q9UJW0 460 aa3.38□□□□□ -1.87
RNF111-211ENST00000560952 LINC01387J3KSC0 135 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 FSCN2O14926 492 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 EREGO14944 169 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 ZSCAN29Q8IWY8 852 aaPredicted RBP3.37□□□□□ -1.87
RNF111-211ENST00000560952 FAM9BQ8IZU0 186 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 WFDC12Q8WWY7 111 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 SGSM3Q96HU1 749 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 POP1Q99575 1024 aaKnown RBP3.37□□□□□ -1.87
RNF111-211ENST00000560952 PPP4R2Q9NY27 417 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 A6NHS1 94 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 NFKBIEO00221 500 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 DEAF1O75398 565 aaPredicted RBP3.37□□□□□ -1.87
RNF111-211ENST00000560952 UVSSAQ2YD98 709 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 KIAA0319Q5VV43 1072 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 ANKRD13AQ8IZ07 590 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 NXPE3Q969Y0 559 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 CHMP4BQ9H444 224 aaKnown RBP3.37□□□□□ -1.87
RNF111-211ENST00000560952 TPSG1Q9NRR2 321 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 FOXD3Q9UJU5 478 aaPredicted RBP3.37□□□□□ -1.87
RNF111-211ENST00000560952 SOX13Q9UN79 622 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 TRAK1Q9UPV9 953 aa3.37□□□□□ -1.87
RNF111-211ENST00000560952 F8W735 103 aaPredicted RBP3.36□□□□□ -1.87
RNF111-211ENST00000560952 PTPN12Q05209 780 aaKnown RBP3.36□□□□□ -1.87
RNF111-211ENST00000560952 C19orf57Q0VDD7 668 aa3.36□□□□□ -1.87
RNF111-211ENST00000560952 IKBKEQ14164 716 aa3.36□□□□□ -1.87
RNF111-211ENST00000560952 SHISA2Q6UWI4 295 aa3.36□□□□□ -1.87
RNF111-211ENST00000560952 SPATA32Q96LK8 384 aa3.36□□□□□ -1.87
RNF111-211ENST00000560952 ZKSCAN3Q9BRR0 538 aa3.36□□□□□ -1.87
RNF111-211ENST00000560952 GSC2O15499 205 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 MARCH6O60337 910 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 EPHA1P21709 976 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 IREB2P48200 963 aaKnown RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 ECM1Q16610 540 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 DUOXA2Q1HG44 320 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 PRSS36Q5K4E3 855 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 SPTY2D1Q68D10 685 aaPredicted RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 TP53INP1Q96A56 240 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 RNF208Q9H0X6 261 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 MYH16Q9H6N6 1097 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 LIN7BQ9HAP6 207 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 JAG2Q9Y219 1238 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 UNCXA6NJT0 531 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 CANXP27824 592 aaKnown RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 NOS3P29474 1203 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 FAM193AP78312 1265 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 ANKRD34AQ69YU3 496 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 Q6ZS46 218 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 ACAD11Q709F0 780 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 DZIP1LQ8IYY4 767 aaKnown RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 ASAP3Q8TDY4 903 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 SSBP4Q9BWG4 385 aaPredicted RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 SH2B1Q9NRF2 756 aaPredicted RBP3.35□□□□□ -1.87
RNF111-211ENST00000560952 HIF3AQ9Y2N7 669 aa3.35□□□□□ -1.87
RNF111-211ENST00000560952 B8ZZF3 427 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 SART1O43290 800 aaKnown RBP3.34□□□□□ -1.87
RNF111-211ENST00000560952 XRCC5P13010 732 aaKnown RBP3.34□□□□□ -1.87
RNF111-211ENST00000560952 MAPK1P28482 360 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 PLCB3Q01970 1234 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 RPS26P11Q5JNZ5 115 aaPredicted RBP3.34□□□□□ -1.87
RNF111-211ENST00000560952 CCNJLQ8IV13 435 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 EHD4Q9H223 541 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 CLEC4MQ9H2X3 399 aaPredicted RBP3.34□□□□□ -1.87
RNF111-211ENST00000560952 NLRP2Q9NX02 1062 aa3.34□□□□□ -1.87
RNF111-211ENST00000560952 A0A096LPE4 126 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 A0A1W2PP55 124 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 A0A1W2PPZ6 126 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 MEGF11A6BM72 1044 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 EIF1AYO14602 144 aaKnown RBP3.34□□□□□ -1.88
RNF111-211ENST00000560952 GLB1P16278 677 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 ATP2B2Q01814 1243 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 PEAR1Q5VY43 1037 aaPredicted RBP3.34□□□□□ -1.88
RNF111-211ENST00000560952 PRPF40BQ6NWY9 871 aaKnown RBP3.34□□□□□ -1.88
RNF111-211ENST00000560952 TXNDC11Q6PKC3 985 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 GALNT11Q8NCW6 608 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 FBF1Q8TES7 1133 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 SLC7A3Q8WY07 619 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 CCDC74AQ96AQ1 378 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 NIF3L1Q9GZT8 377 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 CYP4F12Q9HCS2 524 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 IGSF5Q9NSI5 407 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 IVNS1ABPQ9Y6Y0 642 aa3.34□□□□□ -1.88
RNF111-211ENST00000560952 GIPC1O14908 333 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms