RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MTHFSP49914 203 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 ATP7AQ04656 1500 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 TTC22Q5TAA0 569 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 IPO4Q8TEX9 1081 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 VTI1AQ96AJ9 217 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 TSPYL1Q9H0U9 437 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 TULP4Q9NRJ4 1543 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 DCTN4Q9UJW0 460 aa7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 CDV3Q9UKY7 258 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 RRP7AQ9Y3A4 280 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-209ENST00000560307 PIK3C2BO00750 1634 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 LRRC7Q96NW7 1537 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 FAM135BQ49AJ0 1406 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 PTCD1O75127 700 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 ANAPC15P60006 121 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 SF3B2Q13435 895 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 ZMYM1Q5SVZ6 1142 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 CCDC183Q5T5S1 534 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 ANKRD45Q5TZF3 282 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 CHMP7Q8WUX9 453 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 CDK15Q96Q40 435 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 KCTD15Q96SI1 283 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 API5Q9BZZ5 524 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 CGNQ9P2M7 1197 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 ZDHHC9Q9Y397 364 aa7.13□□□□□ -1.27
SNRPA1-209ENST00000560307 CDK12Q9NYV4 1490 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 RGS12O14924 1447 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 CPSF1Q10570 1443 aaKnown RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 PNPLA6Q8IY17 1366 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 U2AF1L5P0DN76 240 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 GSPT1P15170 499 aaKnown RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 TCF3P15923 654 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 WEE1P30291 646 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 CBX1P83916 185 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 U2AF1Q01081 240 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 ATP2B3Q16720 1220 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 VASH1Q7L8A9 365 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 SCG3Q8WXD2 468 aaKnown RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 ASB16Q96NS5 453 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 ZNF358Q9NW07 568 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 N4BP2Q86UW6 1770 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 ITSN1Q15811 1721 aa7.12□□□□□ -1.27
SNRPA1-209ENST00000560307 RTL1A6NKG5 1358 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 KRBA1A5PL33 1030 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 MCCP23508 829 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 SCTRP47872 440 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 KIAA1524Q8TCG1 905 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 TSR2Q969E8 191 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 C1QTNF2Q9BXJ5 285 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 IGSF5Q9NSI5 407 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 HECW2Q9P2P5 1572 aa7.11□□□□□ -1.27
SNRPA1-209ENST00000560307 RPAP1Q9BWH6 1393 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 EVC2Q86UK5 1308 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 SMTNL1A8MU46 457 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 M0R2N6 131 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 ERC2O15083 957 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 EAPPQ56P03 285 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 EFCAB2Q5VUJ9 269 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 RPAP2Q8IXW5 612 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 TNS4Q8IZW8 715 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 OSBPL3Q9H4L5 887 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 TMEM51Q9NW97 253 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 SERTAD1Q9UHV2 236 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 MORC2Q9Y6X9 1032 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 NEXMIFQ5QGS0 1516 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 CHD2O14647 1828 aaKnown RBP7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 ATP10DQ9P241 1426 aa7.1□□□□□ -1.27
SNRPA1-209ENST00000560307 ADCY5O95622 1261 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 MX1P20591 662 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 ARHGAP4P98171 946 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 TSNAXIP1Q2TAA8 658 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 TRMT44Q8IYL2 757 aaKnown RBP7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 ANKRD44Q8N8A2 993 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 HELQQ8TDG4 1101 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 DNAJC2Q99543 621 aaKnown RBP7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 CYLDQ9NQC7 956 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 IFT57Q9NWB7 429 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 CALCOCO1Q9P1Z2 691 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 DDX41Q9UJV9 622 aaKnown RBP7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 PAXBP1Q9Y5B6 917 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 ARHGEF40Q8TER5 1519 aa7.09□□□□□ -1.27
SNRPA1-209ENST00000560307 CAMSAP1Q5T5Y3 1602 aa7.09□□□□□ -1.28
SNRPA1-209ENST00000560307 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 ADGRF5Q8IZF2 1346 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 BACH1O14867 736 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 FAM13AO94988 1023 aa7.08□□□□□ -1.28
SNRPA1-209ENST00000560307 BCRP11274 1271 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms