RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
PBX1-213ENST00000558796 WDR33Q9C0J8 1336 aaKnown RBP13.6□□□□□ -0.23
PBX1-213ENST00000558796 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
PBX1-213ENST00000558796 SSC5DA1L4H1 1573 aa13.59□□□□□ -0.23
PBX1-213ENST00000558796 HUNKP57058 714 aa13.59□□□□□ -0.23
PBX1-213ENST00000558796 RASGRF1Q13972 1273 aa13.59□□□□□ -0.23
PBX1-213ENST00000558796 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
PBX1-213ENST00000558796 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
PBX1-213ENST00000558796 SEMA3EO15041 775 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 HSPA1AP0DMV8 641 aaKnown RBP13.58□□□□□ -0.24
PBX1-213ENST00000558796 HSPA1BP0DMV9 641 aaKnown RBP13.58□□□□□ -0.24
PBX1-213ENST00000558796 PRDX5P30044 214 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 PDE3AQ14432 1141 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 GORABQ5T7V8 394 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 TEKT1Q969V4 418 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
PBX1-213ENST00000558796 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 DENND2AQ9ULE3 1009 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 MAST3O60307 1309 aa13.58□□□□□ -0.24
PBX1-213ENST00000558796 AOC2O75106 756 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 ECE1P42892 770 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 PI16Q6UXB8 463 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 DEFB129Q9H1M3 183 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 ZNF70Q9UC06 446 aaPredicted RBP13.57□□□□□ -0.24
PBX1-213ENST00000558796 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
PBX1-213ENST00000558796 SUGT1Q9Y2Z0 365 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 LAMB1P07942 1786 aa13.57□□□□□ -0.24
PBX1-213ENST00000558796 MYH7P12883 1935 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 FOCADQ5VW36 1801 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
PBX1-213ENST00000558796 NF2P35240 595 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 PRKG1Q13976 671 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 TTLL12Q14166 644 aaPredicted RBP13.56□□□□□ -0.24
PBX1-213ENST00000558796 DIXDC1Q155Q3 683 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 DBNDD2Q9BQY9 259 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
PBX1-213ENST00000558796 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
PBX1-213ENST00000558796 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 APBB1O00213 710 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 ARID4AP29374 1257 aaPredicted RBP13.55□□□□□ -0.24
PBX1-213ENST00000558796 CACNB3P54284 484 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
PBX1-213ENST00000558796 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
PBX1-213ENST00000558796 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 CHMP4BQ9H444 224 aaKnown RBP13.55□□□□□ -0.24
PBX1-213ENST00000558796 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 FZD1Q9UP38 647 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 DAGLAQ9Y4D2 1042 aa13.55□□□□□ -0.24
PBX1-213ENST00000558796 PDS5AQ29RF7 1337 aaKnown RBP13.55□□□□□ -0.24
PBX1-213ENST00000558796 UBE2Q2LH0YL09 131 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 HMMRO75330 724 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 MCAMP43121 646 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
PBX1-213ENST00000558796 RASA3Q14644 834 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 DZIP1Q86YF9 867 aaKnown RBP13.54□□□□□ -0.24
PBX1-213ENST00000558796 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
PBX1-213ENST00000558796 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 HMG20BQ9P0W2 317 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 ABCF2Q9UG63 623 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 PPP2R3BQ9Y5P8 575 aa13.54□□□□□ -0.24
PBX1-213ENST00000558796 FKBP1BP68106 108 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
PBX1-213ENST00000558796 APOBEC3HQ6NTF7 200 aaKnown RBP13.53□□□□□ -0.24
PBX1-213ENST00000558796 HHIPL2Q6UWX4 724 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
PBX1-213ENST00000558796 ZIC5Q96T25 663 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
PBX1-213ENST00000558796 BCL11AQ9H165 835 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 IL1RAPL2Q9NP60 686 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 TMOD2Q9NZR1 351 aa13.53□□□□□ -0.24
PBX1-213ENST00000558796 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
PBX1-213ENST00000558796 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.24
PBX1-213ENST00000558796 FAM155AB1AL88 458 aaPredicted RBP13.52□□□□□ -0.25
PBX1-213ENST00000558796 ZBTB22O15209 634 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 FOXN1O15353 648 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 UQCRFS1P1P0C7P4 283 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 TBC1D9Q6ZT07 1266 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 AACSQ86V21 672 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 RASAL3Q86YV0 1011 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
PBX1-213ENST00000558796 SNRKQ9NRH2 765 aa13.52□□□□□ -0.25
PBX1-213ENST00000558796 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
PBX1-213ENST00000558796 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
PBX1-213ENST00000558796 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
PBX1-213ENST00000558796 SLC10A3P09131 477 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms