RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RPS26P11Q5JNZ5 115 aaPredicted RBP6.04□□□□□ -1.44
SPG11-206ENST00000558093 NUTM2GQ5VZR2 741 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 Q6ZS46 218 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 UTP4Q969X6 686 aaKnown RBP6.04□□□□□ -1.44
SPG11-206ENST00000558093 SSBP4Q9BWG4 385 aaPredicted RBP6.04□□□□□ -1.44
SPG11-206ENST00000558093 SRCIN1Q9C0H9 1055 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 CYP4F12Q9HCS2 524 aa6.04□□□□□ -1.44
SPG11-206ENST00000558093 GIPC1O14908 333 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 DYRK3O43781 588 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 ADAM23O75077 832 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 PRPF40AO75400 957 aaKnown RBP6.03□□□□□ -1.44
SPG11-206ENST00000558093 HNRNPUQ00839 825 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPG11-206ENST00000558093 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 AP3B2Q13367 1082 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 PDE3AQ14432 1141 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 UVSSAQ2YD98 709 aa6.03□□□□□ -1.44
SPG11-206ENST00000558093 DZIP1LQ8IYY4 767 aaKnown RBP6.03□□□□□ -1.44
SPG11-206ENST00000558093 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 PREPP48147 710 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 COL19A1Q14993 1142 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 NKAPLQ5M9Q1 402 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 C12orf50Q8NA57 414 aaPredicted RBP6.02□□□□□ -1.45
SPG11-206ENST00000558093 C12orf49Q9H741 205 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 TMEM39AQ9NV64 488 aa6.02□□□□□ -1.45
SPG11-206ENST00000558093 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
SPG11-206ENST00000558093 USP17L7P0C7H9 530 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 GNA15P30679 374 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 FAAP100Q0VG06 881 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 EXOSC6Q5RKV6 272 aaKnown RBP6.01□□□□□ -1.45
SPG11-206ENST00000558093 TMCO4Q5TGY1 634 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 TPTE2Q6XPS3 522 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 DNAJC14Q6Y2X3 702 aaPredicted RBP6.01□□□□□ -1.45
SPG11-206ENST00000558093 PRR23CQ6ZRP0 262 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 NPAS4Q8IUM7 802 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 FRMD6Q96NE9 622 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 UBL7Q96S82 380 aaPredicted RBP6.01□□□□□ -1.45
SPG11-206ENST00000558093 TRIM56Q9BRZ2 755 aaKnown RBP6.01□□□□□ -1.45
SPG11-206ENST00000558093 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 RAD18Q9NS91 495 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 FAM8A1Q9UBU6 413 aa6.01□□□□□ -1.45
SPG11-206ENST00000558093 MEGF11A6BM72 1044 aa6□□□□□ -1.45
SPG11-206ENST00000558093 ERCC3P19447 782 aa6□□□□□ -1.45
SPG11-206ENST00000558093 EIF4BP23588 611 aaKnown RBP6□□□□□ -1.45
SPG11-206ENST00000558093 XPCQ01831 940 aaPredicted RBP6□□□□□ -1.45
SPG11-206ENST00000558093 AKAP4Q5JQC9 854 aa6□□□□□ -1.45
SPG11-206ENST00000558093 MYRFLQ96LU7 910 aa6□□□□□ -1.45
SPG11-206ENST00000558093 DUSP9Q99956 384 aaKnown RBP6□□□□□ -1.45
SPG11-206ENST00000558093 TMPRSS13Q9BYE2 586 aa6□□□□□ -1.45
SPG11-206ENST00000558093 ZC3H12CQ9C0D7 883 aaKnown RBP6□□□□□ -1.45
SPG11-206ENST00000558093 NRSN2Q9GZP1 204 aa6□□□□□ -1.45
SPG11-206ENST00000558093 KCNF1Q9H3M0 494 aa6□□□□□ -1.45
SPG11-206ENST00000558093 TTF2Q9UNY4 1162 aaKnown RBP6□□□□□ -1.45
SPG11-206ENST00000558093 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
SPG11-206ENST00000558093 RAXQ9Y2V3 346 aa6□□□□□ -1.45
SPG11-206ENST00000558093 FBXO24O75426 580 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 DLGAP3O95886 979 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 RXRBP28702 533 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.99□□□□□ -1.45
SPG11-206ENST00000558093 SULF2Q8IWU5 870 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 SMG8Q8ND04 991 aaKnown RBP5.99□□□□□ -1.45
SPG11-206ENST00000558093 C3orf58Q8NDZ4 430 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 FAM46AQ96IP4 442 aaKnown RBP5.99□□□□□ -1.45
SPG11-206ENST00000558093 CEP44Q9C0F1 390 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 STOML1Q9UBI4 398 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 PPM1HQ9ULR3 514 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 SAMM50Q9Y512 469 aa5.99□□□□□ -1.45
SPG11-206ENST00000558093 ECEL1O95672 775 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 CTSBP07858 339 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 ADH5P11766 374 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 BMP3P12645 472 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 USP11P51784 963 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 PSMD2Q13200 908 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 PRSS36Q5K4E3 855 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 ARMC10Q8N2F6 343 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 KCNB2Q92953 911 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 YIPF2Q9BWQ6 316 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
SPG11-206ENST00000558093 GSTP1P09211 210 aaKnown RBP5.97□□□□□ -1.45
SPG11-206ENST00000558093 DRD2P14416 443 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 FAM20CQ8IXL6 584 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 ACSBG1Q96GR2 724 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 EMILIN2Q9BXX0 1053 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 MRS2Q9HD23 443 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 PARP2Q9UGN5 583 aa5.97□□□□□ -1.45
SPG11-206ENST00000558093 TIAF1O95411 115 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 LIG1P18858 919 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 FSTP19883 344 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 RAB6AP20340 208 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 NME2P22392 152 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 ITGAEP38570 1179 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 SOX4Q06945 474 aaPredicted RBP5.96□□□□□ -1.46
SPG11-206ENST00000558093 SGO2Q562F6 1265 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 BEND4Q6ZU67 534 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 DYMQ7RTS9 669 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 NECAB3Q96P71 396 aaPredicted RBP5.96□□□□□ -1.46
SPG11-206ENST00000558093 BCL11AQ9H165 835 aa5.96□□□□□ -1.46
SPG11-206ENST00000558093 AK5Q9Y6K8 562 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms