RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 UBXN2AP68543 259 aa13.01□□□□□ -0.33
ABCD4-227ENST00000557554 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
ABCD4-227ENST00000557554 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 ZNF70Q9UC06 446 aaPredicted RBP13.01□□□□□ -0.33
ABCD4-227ENST00000557554 SNCAIPQ9Y6H5 919 aa13.01□□□□□ -0.33
ABCD4-227ENST00000557554 MYPNQ86TC9 1320 aa13.01□□□□□ -0.33
ABCD4-227ENST00000557554 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
ABCD4-227ENST00000557554 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
ABCD4-227ENST00000557554 PRKCZQ05513 592 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 SNAPC2Q13487 334 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 ERO1BQ86YB8 467 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 TDHQ8IZJ6 230 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
ABCD4-227ENST00000557554 GUCD1Q96NT3 240 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 METTL22Q9BUU2 404 aaPredicted RBP13□□□□□ -0.33
ABCD4-227ENST00000557554 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
ABCD4-227ENST00000557554 BIN2Q9UBW5 565 aaPredicted RBP13□□□□□ -0.33
ABCD4-227ENST00000557554 LAMA2P24043 3122 aaKnown RBP12.99□□□□□ -0.33
ABCD4-227ENST00000557554 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 MUC3AQ02505 3323 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 SNAP23O00161 211 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 TFRCP02786 760 aaKnown RBP12.99□□□□□ -0.33
ABCD4-227ENST00000557554 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
ABCD4-227ENST00000557554 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
ABCD4-227ENST00000557554 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 CSADQ9Y600 493 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 MYH3P11055 1940 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
ABCD4-227ENST00000557554 MGAMO43451 1857 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 RPTORQ8N122 1335 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 MAGEA10P43363 369 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-227ENST00000557554 MOGSQ13724 837 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 FAM109BQ6ICB4 259 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-227ENST00000557554 ANKRD23Q86SG2 305 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 ZKSCAN4Q969J2 545 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-227ENST00000557554 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
ABCD4-227ENST00000557554 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
ABCD4-227ENST00000557554 BCRP11274 1271 aa12.97□□□□□ -0.33
ABCD4-227ENST00000557554 RBM5P52756 815 aaKnown RBP eCLIP12.97□□□□□ -0.332e-6■□□□□ 10.6
ABCD4-227ENST00000557554 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
ABCD4-227ENST00000557554 PPIL2Q13356 520 aa12.97□□□□□ -0.33
ABCD4-227ENST00000557554 PXYLP1Q8TE99 480 aa12.97□□□□□ -0.33
ABCD4-227ENST00000557554 DIS3LQ8TF46 1054 aaKnown RBP12.97□□□□□ -0.33
ABCD4-227ENST00000557554 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
ABCD4-227ENST00000557554 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 PDHXO00330 501 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 ADCY3O60266 1144 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 IGHMBP2P38935 993 aaKnown RBP12.96□□□□□ -0.33
ABCD4-227ENST00000557554 CHRNDQ07001 517 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 NECAB2Q7Z6G3 386 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 SERPINA10Q9UK55 444 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
ABCD4-227ENST00000557554 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 INHAP05111 366 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 ELNP15502 786 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 COL9A1P20849 921 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 PPATQ06203 517 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
ABCD4-227ENST00000557554 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 DOCK3Q8IZD9 2030 aa12.95□□□□□ -0.34
ABCD4-227ENST00000557554 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 H7C1W4 665 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 TAF5LO75529 589 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 CSF1RP07333 972 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 SYN1P17600 705 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 ITGA6P23229 1130 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 FLT3LGP49771 235 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 FCGRTP55899 365 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 IRF5Q13568 498 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.94□□□□□ -0.34
ABCD4-227ENST00000557554 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 JAG2Q9Y219 1238 aa12.94□□□□□ -0.34
ABCD4-227ENST00000557554 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
ABCD4-227ENST00000557554 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
ABCD4-227ENST00000557554 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
ABCD4-227ENST00000557554 WRNIP1Q96S55 665 aa12.93□□□□□ -0.34
ABCD4-227ENST00000557554 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
ABCD4-227ENST00000557554 UBE2OQ9C0C9 1292 aaKnown RBP12.93□□□□□ -0.34
ABCD4-227ENST00000557554 COL2A1P02458 1487 aaPredicted RBP12.92□□□□□ -0.34
ABCD4-227ENST00000557554 KCNJ4P48050 445 aa12.92□□□□□ -0.34
ABCD4-227ENST00000557554 TNNI2P48788 182 aa12.92□□□□□ -0.34
ABCD4-227ENST00000557554 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
ABCD4-227ENST00000557554 TTF2Q9UNY4 1162 aaKnown RBP12.92□□□□□ -0.34
ABCD4-227ENST00000557554 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
ABCD4-227ENST00000557554 CYP2C8P10632 490 aa12.91□□□□□ -0.34
ABCD4-227ENST00000557554 ZNF804AQ7Z570 1209 aa12.91□□□□□ -0.34
ABCD4-227ENST00000557554 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
ABCD4-227ENST00000557554 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
ABCD4-227ENST00000557554 RAPGEFL1Q9UHV5 662 aa12.91□□□□□ -0.34
ABCD4-227ENST00000557554 INPP5BP32019 993 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 CRKP46108 304 aa12.9□□□□□ -0.34
ABCD4-227ENST00000557554 CASP7P55210 303 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms