RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 BRD2P25440 801 aaKnown RBP8.61□□□□□ -1.03
SCFD1-212ENST00000554486 TNP2Q05952 138 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 IER5Q5VY09 327 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 GOLGA6L1Q8N7Z2 621 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 ORAI2Q96SN7 254 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 IQSEC2Q5JU85 1478 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 CPSF1Q10570 1443 aaKnown RBP8.61□□□□□ -1.03
SCFD1-212ENST00000554486 A0A1W2PP64 1363 aa8.61□□□□□ -1.03
SCFD1-212ENST00000554486 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-212ENST00000554486 MON2Q7Z3U7 1717 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 ACEP12821 1306 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 MICAL2O94851 1124 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 CTBSQ01459 385 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 FAM182BQ5T319 152 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCFD1-212ENST00000554486 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 TREML1Q86YW5 311 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
SCFD1-212ENST00000554486 KIF1AQ12756 1690 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 OIP5O43482 229 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 INPP5BP32019 993 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 EIF1AXP47813 144 aaKnown RBP8.59□□□□□ -1.03
SCFD1-212ENST00000554486 TYRO3Q06418 890 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 HIF1AQ16665 826 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
SCFD1-212ENST00000554486 NRKQ7Z2Y5 1582 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 USP6P35125 1406 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 SSH2Q76I76 1423 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 FZD6O60353 706 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
SCFD1-212ENST00000554486 PODNQ7Z5L7 613 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 GALNT6Q8NCL4 622 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
SCFD1-212ENST00000554486 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
SCFD1-212ENST00000554486 KTN1Q86UP2 1357 aaKnown RBP8.58□□□□□ -1.04
SCFD1-212ENST00000554486 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
SCFD1-212ENST00000554486 C2CD2LO14523 706 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 EFSO43281 561 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 FAM13AO94988 1023 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 ARAFP10398 606 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 IDH3AP50213 366 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
SCFD1-212ENST00000554486 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
SCFD1-212ENST00000554486 BEND7Q8N7W2 519 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-212ENST00000554486 DDX17Q92841 729 aaKnown RBP8.57□□□□□ -1.04
SCFD1-212ENST00000554486 STRN4Q9NRL3 753 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 USP20Q9Y2K6 914 aa8.57□□□□□ -1.04
SCFD1-212ENST00000554486 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 NHSL1Q5SYE7 1610 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 PHF20L1A8MW92 1017 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 TOM1O60784 492 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 ZAP70P43403 619 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 EDARADDQ8WWZ3 215 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-212ENST00000554486 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
SCFD1-212ENST00000554486 TRPM3Q9HCF6 1732 aaPredicted RBP8.56□□□□□ -1.04
SCFD1-212ENST00000554486 TTC21BQ7Z4L5 1316 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 CD33P20138 364 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-212ENST00000554486 SFSWAPQ12872 951 aaKnown RBP8.55□□□□□ -1.04
SCFD1-212ENST00000554486 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 ABTB2Q8N961 1025 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 GGA1Q9UJY5 639 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 KNSTRNQ9Y448 316 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 NPC1L1Q9UHC9 1359 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 PXDNQ92626 1479 aa8.55□□□□□ -1.04
SCFD1-212ENST00000554486 PIK3C2AO00443 1686 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-212ENST00000554486 FYB1O15117 783 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 ADH6P28332 368 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 SLCO4C1Q6ZQN7 724 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 KRT28Q7Z3Y7 464 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.042e-11■■■□□ 15
SCFD1-212ENST00000554486 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 CEP63Q96MT8 703 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 ANKRD26Q9UPS8 1709 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 AHDC1Q5TGY3 1603 aaPredicted RBP8.54□□□□□ -1.04
SCFD1-212ENST00000554486 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 TTC21AQ8NDW8 1320 aa8.54□□□□□ -1.04
SCFD1-212ENST00000554486 ALS2Q96Q42 1657 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 SBNO1A3KN83 1393 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 IGHA2P01877 340 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 AMPD1P23109 780 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 KCNQ4P56696 695 aa8.53□□□□□ -1.04
SCFD1-212ENST00000554486 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms