RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 PDE6AP16499 860 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 PYCARDQ9ULZ3 195 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 MTERF4Q7Z6M4 381 aaKnown RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 MAGEB6Q8N7X4 407 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 SPC24Q8NBT2 197 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 KCNF1Q9H3M0 494 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 NAP1L2Q9ULW6 460 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 COL4A1P02462 1669 aa17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-201ENST00000554308 SLC10A5Q5PT55 438 aa17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 IMMTQ16891 758 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 CTNNA3Q9UI47 895 aa17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 MTMR6Q9Y217 621 aa17.23■□□□□ 0.35
PPP4R3A-201ENST00000554308 VPS37CA5D8V6 355 aaPredicted RBP17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 VPS37DQ86XT2 251 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 SPTLC3Q9NUV7 552 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 TAF1P21675 1872 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 PRIMPOLQ96LW4 560 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 LRP2BPQ9P2M1 347 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
PPP4R3A-201ENST00000554308 ZNF213O14771 459 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 NFIXQ14938 502 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 NHSQ6T4R5 1651 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
PPP4R3A-201ENST00000554308 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 TCRBV5S4A2TA0A5A2 114 aa17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
PPP4R3A-201ENST00000554308 LRP5O75197 1615 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 CAVIN4Q5BKX8 364 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 JAK2O60674 1132 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 KLRK1P26718 216 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 FERMT3Q86UX7 667 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 MIGA1Q8NAN2 632 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 KIAA1524Q8TCG1 905 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
PPP4R3A-201ENST00000554308 RGL2O15211 777 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 MBD4O95243 580 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 CBX1P83916 185 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 CAMK4Q16566 473 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 TFCP2L1Q9NZI6 479 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 KIF3AQ9Y496 699 aa17.18■□□□□ 0.34
PPP4R3A-201ENST00000554308 TM4SF1P30408 202 aa17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 SCRN1Q12765 414 aa17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 FAM84BQ96KN1 310 aaPredicted RBP17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 NCOA5Q9HCD5 579 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 MYO5AQ9Y4I1 1855 aaKnown RBP17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
PPP4R3A-201ENST00000554308 PRKAB2O43741 272 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 LIG1P18858 919 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 PPP4R3BQ5MIZ7 849 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 RALYLQ86SE5 291 aaKnown RBP17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 TTC6Q86TZ1 520 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 INCENPQ9NQS7 918 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
PPP4R3A-201ENST00000554308 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 GYS1P13807 737 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 JAG2Q9Y219 1238 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 PRC1O43663 620 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 PTGS1P23219 599 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
PPP4R3A-201ENST00000554308 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms