RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 CCDC102BQ68D86 513 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 NAA16Q6N069 864 aaPredicted RBP8.05□□□□□ -1.12
CCDC59-206ENST00000552412 Q6ZUG5 572 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 USP48Q86UV5 1035 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 GAS2L3Q86XJ1 694 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 SEC62Q99442 399 aaKnown RBP8.05□□□□□ -1.12
CCDC59-206ENST00000552412 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 NIP7Q9Y221 180 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
CCDC59-206ENST00000552412 NDUFB9Q9Y6M9 179 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 LY75O60449 1722 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 MYH15Q9Y2K3 1946 aa8.05□□□□□ -1.12
CCDC59-206ENST00000552412 RIMBP2O15034 1052 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 GPAA1O43292 621 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
CCDC59-206ENST00000552412 GNAT2P19087 354 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 HMGB2P26583 209 aaKnown RBP8.04□□□□□ -1.12
CCDC59-206ENST00000552412 MCM5P33992 734 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 MAP3K12Q12852 859 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 SF3B3Q15393 1217 aaKnown RBP8.04□□□□□ -1.12
CCDC59-206ENST00000552412 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 HS6ST3Q8IZP7 471 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 SYNE4Q8N205 404 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 NECAB1Q8N987 351 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 ACSBG1Q96GR2 724 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 PPP1R9BQ96SB3 815 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 NYXQ9GZU5 481 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 TMEM63CQ9P1W3 806 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 TAF6LQ9Y6J9 622 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 CASZ1Q86V15 1759 aa8.04□□□□□ -1.12
CCDC59-206ENST00000552412 PDS5AQ29RF7 1337 aaKnown RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 SALL1Q9NSC2 1324 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 TAF1LQ8IZX4 1826 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 CHD4Q14839 1912 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 TCRBV5S4A2TA0A5A2 114 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 VPS37CA5D8V6 355 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 NUTM2BA6NNL0 878 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 NUTM2EB1AL46 878 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 UBAP1LF5GYI3 381 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 ZNF213O14771 459 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 UBE4AQ14139 1066 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 SCARF1Q14162 830 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 RALYLQ86SE5 291 aaKnown RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 NUTM2AQ8IVF1 878 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 MB21D2Q8IYB1 491 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 NCOA7Q8NI08 942 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 FOXD4L4Q8WXT5 416 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 BRF1Q92994 677 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
CCDC59-206ENST00000552412 SBF2Q86WG5 1849 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 ZNF804BA4D1E1 1349 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 PNPLA7Q6ZV29 1317 aa8.03□□□□□ -1.12
CCDC59-206ENST00000552412 MYO5AQ9Y4I1 1855 aaKnown RBP8.02□□□□□ -1.12
CCDC59-206ENST00000552412 SEMA3EO15041 775 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 FOXP2O15409 715 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 RPS6KA4O75676 772 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 FGAP02671 866 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 PDE6AP16499 860 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 PHKA1P46020 1223 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 NT5C2P49902 561 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 PIP4K2BP78356 416 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 SCRN1Q12765 414 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 TRDNQ13061 729 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 FAM98CQ17RN3 349 aaKnown RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 UVSSAQ2YD98 709 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 SLC9C2Q5TAH2 1124 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 SPATA5Q8NB90 893 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 NSUN7Q8NE18 718 aaKnown RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 TRIM44Q96DX7 344 aaPredicted RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 LARP6Q9BRS8 491 aaKnown RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 PANK2Q9BZ23 570 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 PUS7LQ9H0K6 701 aaKnown RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 TSPY26PQ9H489 355 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 BSDC1Q9NW68 430 aaPredicted RBP8.02□□□□□ -1.13
CCDC59-206ENST00000552412 NARFQ9UHQ1 456 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 CFAP45Q9UL16 551 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
CCDC59-206ENST00000552412 NID2Q14112 1375 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 SYCE3A1L190 88 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 H3BQV1 296 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 FIBPO43427 364 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 PPP1R37O75864 691 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 CDKL5O76039 1030 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 CHGBP05060 677 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
CCDC59-206ENST00000552412 RCAN1P53805 252 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
CCDC59-206ENST00000552412 RESTQ13127 1097 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
CCDC59-206ENST00000552412 IFFO2Q5TF58 517 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms