RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 STK38Q15208 465 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 XPO4Q9C0E2 1151 aaKnown RBP11.95□□□□□ -0.5
ERBB3-214ENST00000550070 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
ERBB3-214ENST00000550070 EYA2O00167 538 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 CABP4P57796 275 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
ERBB3-214ENST00000550070 E4F1Q66K89 784 aaPredicted RBP11.95□□□□□ -0.5
ERBB3-214ENST00000550070 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
ERBB3-214ENST00000550070 IFNKQ9P0W0 207 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
ERBB3-214ENST00000550070 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 BIN1O00499 593 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 SPTLC2O15270 562 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
ERBB3-214ENST00000550070 ARMCX5Q6P1M9 558 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 RAB11FIP4Q86YS3 637 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 EGFL6Q8IUX8 553 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 TJP1Q07157 1748 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 KIF28PB7ZC32 967 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 CSB-PGBD3P0DP91 1061 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 MYSM1Q5VVJ2 828 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-214ENST00000550070 FBXO18Q8NFZ0 1043 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
ERBB3-214ENST00000550070 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 ERO1AQ96HE7 468 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
ERBB3-214ENST00000550070 LOC102724159A0A0B4J2E5 919 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 KLF18A0A0U1RQI7 1052 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 PRC1O43663 620 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 ZNF202O95125 648 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 SMC2O95347 1197 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 YEATS4O95619 227 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 PWP2Q15269 919 aaKnown RBP11.93□□□□□ -0.5
ERBB3-214ENST00000550070 ELF2Q15723 593 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 ALS2Q96Q42 1657 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
ERBB3-214ENST00000550070 FGAP02671 866 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
ERBB3-214ENST00000550070 NCAPHQ15003 741 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 FBXO38Q6PIJ6 1188 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
ERBB3-214ENST00000550070 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
ERBB3-214ENST00000550070 SPEF2Q9C093 1822 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 COL18A1P39060 1754 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
ERBB3-214ENST00000550070 ADORA1P30542 326 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 ANTXR2P58335 489 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 NLRP12P59046 1061 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
ERBB3-214ENST00000550070 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
ERBB3-214ENST00000550070 PPP1R13BQ96KQ4 1090 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 NUP188Q5SRE5 1749 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 GOLGA8BA8MQT2 603 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 CHRNA2Q15822 529 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 IMMTQ16891 758 aaKnown RBP11.92□□□□□ -0.5
ERBB3-214ENST00000550070 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.92□□□□□ -0.5
ERBB3-214ENST00000550070 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 C1orf167Q5SNV9 1468 aa11.92□□□□□ -0.5
ERBB3-214ENST00000550070 MST1RQ04912 1400 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
ERBB3-214ENST00000550070 CIAO1O76071 339 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 A1BGP04217 495 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 PFKFB1P16118 471 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
ERBB3-214ENST00000550070 KIF2AO00139 706 aaPredicted RBP11.91□□□□□ -0.5
ERBB3-214ENST00000550070 KIF23Q02241 960 aaPredicted RBP11.91□□□□□ -0.5
ERBB3-214ENST00000550070 SCARF1Q14162 830 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 SYNE3Q6ZMZ3 975 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 CCDC150Q8NCX0 1101 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 FAM53CQ9NYF3 392 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
ERBB3-214ENST00000550070 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 PKD1L3Q7Z443 1732 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 DDX60Q8IY21 1712 aaKnown RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 NPHP1O15259 732 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 SFPQP23246 707 aaKnown RBP eCLIP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 CMA1P23946 247 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 LMOD1P29536 600 aaPredicted RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 MARCKSP29966 332 aaPredicted RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 GABPB1Q06547 395 aaPredicted RBP11.9□□□□□ -0.5
ERBB3-214ENST00000550070 TTC39AQ5SRH9 613 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 CCDC191Q8NCU4 936 aa11.9□□□□□ -0.5
ERBB3-214ENST00000550070 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms