RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 COL6A3P12111 3177 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 RBM5P52756 815 aaKnown RBP eCLIP20.42■□□□□ 0.864e-6■■□□□ 12.4
DDX55-212ENST00000544738 RASA3Q14644 834 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 EPHA10Q5JZY3 1008 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 C15orf52Q6ZUT6 534 aaKnown RBP20.42■□□□□ 0.86
DDX55-212ENST00000544738 CERS5Q8N5B7 392 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 MS4A4AQ96JQ5 239 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 CD209Q9NNX6 404 aa20.42■□□□□ 0.86
DDX55-212ENST00000544738 CCL15-CCL14A0A0B4J2E2 113 aa20.41■□□□□ 0.86
DDX55-212ENST00000544738 CCL15Q16663 113 aa20.41■□□□□ 0.86
DDX55-212ENST00000544738 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
DDX55-212ENST00000544738 BRI3BPQ8WY22 251 aa20.41■□□□□ 0.86
DDX55-212ENST00000544738 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 UTYO14607 1347 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 TAF5LO75529 589 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 ECM2O94769 699 aaPredicted RBP20.4■□□□□ 0.86
DDX55-212ENST00000544738 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 AOX1Q06278 1338 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 ALDH1L2Q3SY69 923 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
DDX55-212ENST00000544738 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 ARHGAP39Q9C0H5 1083 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
DDX55-212ENST00000544738 KIF22Q14807 665 aa20.39■□□□□ 0.85
DDX55-212ENST00000544738 CUL9Q8IWT3 2517 aa20.39■□□□□ 0.85
DDX55-212ENST00000544738 SNAP23O00161 211 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
DDX55-212ENST00000544738 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
DDX55-212ENST00000544738 GTF2A2P52657 109 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
DDX55-212ENST00000544738 JAG2Q9Y219 1238 aa20.38■□□□□ 0.85
DDX55-212ENST00000544738 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
DDX55-212ENST00000544738 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
DDX55-212ENST00000544738 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
DDX55-212ENST00000544738 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
DDX55-212ENST00000544738 PLIN1O60240 522 aa20.36■□□□□ 0.85
DDX55-212ENST00000544738 MTFR1Q15390 333 aa20.36■□□□□ 0.85
DDX55-212ENST00000544738 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
DDX55-212ENST00000544738 KAZALD1Q96I82 304 aa20.36■□□□□ 0.85
DDX55-212ENST00000544738 ZNF646O15015 1829 aaPredicted RBP20.36■□□□□ 0.85
DDX55-212ENST00000544738 IL1R1P14778 569 aa20.35■□□□□ 0.85
DDX55-212ENST00000544738 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
DDX55-212ENST00000544738 LACTBP83111 547 aaPredicted RBP20.35■□□□□ 0.85
DDX55-212ENST00000544738 UBE4AQ14139 1066 aa20.34■□□□□ 0.85
DDX55-212ENST00000544738 RABL6Q3YEC7 729 aaPredicted RBP20.34■□□□□ 0.85
DDX55-212ENST00000544738 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
DDX55-212ENST00000544738 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
DDX55-212ENST00000544738 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
DDX55-212ENST00000544738 TLR2O60603 784 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 VGLL4Q14135 290 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 HTATIP2Q9BUP3 242 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 ZNF70Q9UC06 446 aaPredicted RBP20.33■□□□□ 0.85
DDX55-212ENST00000544738 NR2E3Q9Y5X4 410 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 CSADQ9Y600 493 aa20.33■□□□□ 0.85
DDX55-212ENST00000544738 MROH5Q6ZUA9 1318 aa20.32■□□□□ 0.84
DDX55-212ENST00000544738 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
DDX55-212ENST00000544738 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
DDX55-212ENST00000544738 TDRD3Q9H7E2 651 aaKnown RBP20.32■□□□□ 0.84
DDX55-212ENST00000544738 A0A1B0GUL6 1792 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 TCP10L2B9ZVM9 353 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 GNRH1P01148 92 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 PRMT2P55345 433 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 NKX2-3Q8TAU0 364 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
DDX55-212ENST00000544738 PRO3102Q9H379 93 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
DDX55-212ENST00000544738 BTBD19C9JJ37 291 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 CETPP11597 493 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 TEPSINQ96N21 525 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 TMEM39BQ9GZU3 492 aa20.3■□□□□ 0.84
DDX55-212ENST00000544738 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
DDX55-212ENST00000544738 HIBADHP31937 336 aaKnown RBP20.29■□□□□ 0.84
DDX55-212ENST00000544738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDX55-212ENST00000544738 RAET1EQ8TD07 263 aa20.29■□□□□ 0.84
DDX55-212ENST00000544738 LAMA3Q16787 3333 aa20.29■□□□□ 0.84
DDX55-212ENST00000544738 LAMB1P07942 1786 aa20.29■□□□□ 0.84
DDX55-212ENST00000544738 SOX1O00570 391 aaPredicted RBP20.28■□□□□ 0.84
DDX55-212ENST00000544738 CCL5P13501 91 aa20.28■□□□□ 0.84
DDX55-212ENST00000544738 PSMC4P43686 418 aa20.28■□□□□ 0.84
DDX55-212ENST00000544738 GJA8P48165 433 aa20.28■□□□□ 0.84
DDX55-212ENST00000544738 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
DDX55-212ENST00000544738 LRCH3Q96II8 777 aa20.28■□□□□ 0.84
DDX55-212ENST00000544738 RNF208Q9H0X6 261 aa20.28■□□□□ 0.84
DDX55-212ENST00000544738 TTF2Q9UNY4 1162 aaKnown RBP20.28■□□□□ 0.84
DDX55-212ENST00000544738 FAM205AQ6ZU69 1335 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.84
DDX55-212ENST00000544738 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
DDX55-212ENST00000544738 GJB1P08034 283 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 HOXD10P28358 340 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 GRK4P32298 578 aa20.27■□□□□ 0.84
DDX55-212ENST00000544738 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms