RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HECW2Q9P2P5 1572 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 USPL1Q5W0Q7 1092 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 HELLSQ9NRZ9 838 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 TNNQ9UQP3 1299 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 ERVK-7P63135 1459 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 RLBP1P12271 317 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 IQCEQ6IPM2 695 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 USP48Q86UV5 1035 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 FAM114A1Q8IWE2 563 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 FERMT2Q96AC1 680 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 KDM6BO15054 1643 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 TRIM75PA6NK02 468 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 STAT6P42226 847 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 GTF2IP78347 998 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 SP4Q02446 784 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 ZYXQ15942 572 aaKnown RBP7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 SEPT7Q16181 437 aaKnown RBP7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 KRT79Q5XKE5 535 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 CHST3Q7LGC8 479 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 SUCLG2Q96I99 432 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 AATFQ9NY61 560 aaKnown RBP eCLIP7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 TCP10Q12799 353 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 MFSD14BQ5SR56 506 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 APPBP2Q92624 585 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 SERPINA10Q9UK55 444 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 CSADQ9Y600 493 aa7.86□□□□□ -1.15
SRGAP1-206ENST00000543397 BIN1O00499 593 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 DHX32Q7L7V1 743 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TMX3Q96JJ7 454 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 ARMT1Q9H993 441 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 RMND1Q9NWS8 449 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 PUF60Q9UHX1 559 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 STK24Q9Y6E0 443 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TOP1P11387 765 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 CRKLP46109 303 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 CTSWP56202 376 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 IL17REQ8NFR9 667 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 SMCR8Q8TEV9 937 aaPredicted RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TEKT1Q969V4 418 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TBC1D2Q9BYX2 928 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TTF2Q9UNY4 1162 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 GOLGA6L10A6NI86 522 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 SSFA2P28290 1259 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 KCNG4Q8TDN1 519 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 ASAP1Q9ULH1 1129 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TRIM35Q9UPQ4 493 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 MAGI3Q5TCQ9 1506 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 PHACTR2O75167 634 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 SYKP43405 635 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 BRINP3Q76B58 766 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 ZKSCAN3Q9BRR0 538 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 RBM28Q9NW13 759 aaKnown RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 MACROD2A1Z1Q3 448 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 ATP2B4P23634 1241 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 SPATA5Q8NB90 893 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 TRIM47Q96LD4 638 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 NUP88Q99567 741 aaPredicted RBP7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 GPCPD1Q9NPB8 672 aa7.85□□□□□ -1.15
SRGAP1-206ENST00000543397 NEURL1BA8MQ27 555 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 PPM1FP49593 454 aaPredicted RBP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 KDM5CP41229 1560 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 KRT13P13646 458 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 SLC1A4P43007 532 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 TERF1P54274 439 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 TTLL7Q6ZT98 887 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 SULF1Q8IWU6 871 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 IMPG2Q9BZV3 1241 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 GRPEL1Q9HAV7 217 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 TTC37Q6PGP7 1564 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 ERBB3P21860 1342 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 ZBTB7BO15156 539 aaPredicted RBP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 GPAA1O43292 621 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 YEATS4O95619 227 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 IL6STP40189 918 aaPredicted RBP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 ZBTB21Q9ULJ3 1066 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 KCNQ3O43525 872 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 PRDM1O75626 825 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 KRT2P35908 639 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 APOBRQ0VD83 1088 aa7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.84□□□□□ -1.15
SRGAP1-206ENST00000543397 MAP3K15Q6ZN16 1313 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ASIC1P78348 528 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 MAPKAPK5Q8IW41 473 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 LOC102724159A0A0B4J2E5 919 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 B4E1Z4 1266 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 RXRAP19793 462 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 PWP2Q15269 919 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 SMC5Q8IY18 1101 aa7.83□□□□□ -1.16
SRGAP1-206ENST00000543397 ZC3H15Q8WU90 426 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms