RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 MECOMQ03112 1051 aa25.26■■□□□ 1.63
OTUB1-211ENST00000543004 DIXDC1Q155Q3 683 aa25.26■■□□□ 1.63
OTUB1-211ENST00000543004 RILPL2Q969X0 211 aa25.26■■□□□ 1.63
OTUB1-211ENST00000543004 CNOT7Q9UIV1 285 aaKnown RBP25.26■■□□□ 1.63
OTUB1-211ENST00000543004 USP17L8P0C7I0 530 aa25.25■■□□□ 1.63
OTUB1-211ENST00000543004 RPS12P25398 132 aaKnown RBP25.25■■□□□ 1.63
OTUB1-211ENST00000543004 EPS15P42566 896 aa25.25■■□□□ 1.63
OTUB1-211ENST00000543004 TTF1Q15361 905 aaPredicted RBP25.25■■□□□ 1.63
OTUB1-211ENST00000543004 MICALL2Q8IY33 904 aa25.25■■□□□ 1.63
OTUB1-211ENST00000543004 GPRC5DQ9NZD1 345 aa25.25■■□□□ 1.63
OTUB1-211ENST00000543004 EGFRP00533 1210 aa25.24■■□□□ 1.63
OTUB1-211ENST00000543004 KBTBD3Q8NAB2 608 aa25.24■■□□□ 1.63
OTUB1-211ENST00000543004 DPF2Q92785 391 aa25.24■■□□□ 1.63
OTUB1-211ENST00000543004 NSUN4Q96CB9 384 aaKnown RBP25.24■■□□□ 1.63
OTUB1-211ENST00000543004 WDR90Q96KV7 1748 aa25.24■■□□□ 1.63
OTUB1-211ENST00000543004 POTECB2RU33 542 aa25.23■■□□□ 1.63
OTUB1-211ENST00000543004 SDSP20132 328 aa25.23■■□□□ 1.63
OTUB1-211ENST00000543004 SPTY2D1Q68D10 685 aaPredicted RBP25.23■■□□□ 1.63
OTUB1-211ENST00000543004 DZIP1Q86YF9 867 aaKnown RBP25.23■■□□□ 1.63
OTUB1-211ENST00000543004 MAGEB6Q8N7X4 407 aa25.23■■□□□ 1.63
OTUB1-211ENST00000543004 L3MBTL3Q96JM7 780 aaPredicted RBP25.23■■□□□ 1.63
OTUB1-211ENST00000543004 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
OTUB1-211ENST00000543004 SUGT1Q9Y2Z0 365 aa25.23■■□□□ 1.63
OTUB1-211ENST00000543004 SAMD7Q7Z3H4 446 aa25.22■■□□□ 1.63
OTUB1-211ENST00000543004 ADGRA1Q86SQ6 560 aa25.22■■□□□ 1.63
OTUB1-211ENST00000543004 EVI5LQ96CN4 794 aa25.22■■□□□ 1.63
OTUB1-211ENST00000543004 SCN4AP35499 1836 aa25.21■■□□□ 1.63
OTUB1-211ENST00000543004 MAP3K12Q12852 859 aa25.21■■□□□ 1.63
OTUB1-211ENST00000543004 RBM26Q5T8P6 1007 aaKnown RBP25.21■■□□□ 1.63
OTUB1-211ENST00000543004 SLC9C2Q5TAH2 1124 aa25.21■■□□□ 1.63
OTUB1-211ENST00000543004 PDE6AP16499 860 aa25.2■■□□□ 1.62
OTUB1-211ENST00000543004 CRKP46108 304 aa25.2■■□□□ 1.62
OTUB1-211ENST00000543004 ZNF280AP59817 542 aaPredicted RBP25.2■■□□□ 1.62
OTUB1-211ENST00000543004 CNTROBQ8N137 903 aa25.2■■□□□ 1.62
OTUB1-211ENST00000543004 OGFOD1Q8N543 542 aa25.2■■□□□ 1.62
OTUB1-211ENST00000543004 TBC1D10BQ4KMP7 808 aaPredicted RBP25.19■■□□□ 1.62
OTUB1-211ENST00000543004 ZNF532Q9HCE3 1301 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 LMOD1P29536 600 aaPredicted RBP25.19■■□□□ 1.62
OTUB1-211ENST00000543004 CFAP100Q494V2 611 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 NAA16Q6N069 864 aaPredicted RBP25.19■■□□□ 1.62
OTUB1-211ENST00000543004 TRPM4Q8TD43 1214 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 RRAGCQ9HB90 399 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 MYOZ2Q9NPC6 264 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 NMRK2Q9NPI5 230 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 HDAC9Q9UKV0 1011 aa25.19■■□□□ 1.62
OTUB1-211ENST00000543004 TCRBV5S4A2TA0A5A2 114 aa25.18■■□□□ 1.62
OTUB1-211ENST00000543004 CYP7A1P22680 504 aa25.18■■□□□ 1.62
OTUB1-211ENST00000543004 ADD2P35612 726 aa25.18■■□□□ 1.62
OTUB1-211ENST00000543004 RBM5P52756 815 aaKnown RBP eCLIP25.18■■□□□ 1.62
OTUB1-211ENST00000543004 DAGLAQ9Y4D2 1042 aa25.18■■□□□ 1.62
OTUB1-211ENST00000543004 MAST3O60307 1309 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 H7C1D1 291 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 BMP2KLQ5H9B9 411 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 TEKT1Q969V4 418 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.17■■□□□ 1.625e-6■■□□□ 11.5
OTUB1-211ENST00000543004 HACL1Q9UJ83 578 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 SERPINA10Q9UK55 444 aa25.17■■□□□ 1.62
OTUB1-211ENST00000543004 HIRAP54198 1017 aaPredicted RBP25.16■■□□□ 1.62
OTUB1-211ENST00000543004 PRMT6Q96LA8 375 aaPredicted RBP25.16■■□□□ 1.62
OTUB1-211ENST00000543004 MROH7-TTC4A0A0A0MT08 1334 aa25.16■■□□□ 1.62
OTUB1-211ENST00000543004 RNF113AO15541 343 aaKnown RBP25.15■■□□□ 1.62
OTUB1-211ENST00000543004 NBPF9Q3BBW0 867 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 MIGA1Q8NAN2 632 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 GAKO14976 1311 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 ASTN2O75129 1339 aaPredicted RBP25.15■■□□□ 1.62
OTUB1-211ENST00000543004 EPHX2P34913 555 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 HDLBPQ00341 1268 aaKnown RBP25.15■■□□□ 1.62
OTUB1-211ENST00000543004 KIF4BQ2VIQ3 1234 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 HHIPL2Q6UWX4 724 aa25.15■■□□□ 1.62
OTUB1-211ENST00000543004 YY1P25490 414 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 GSTO1P78417 241 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 DLGAP5Q15398 846 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 APOBEC3HQ6NTF7 200 aaKnown RBP25.14■■□□□ 1.61
OTUB1-211ENST00000543004 ZDHHC15Q96MV8 337 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 SEC62Q99442 399 aaKnown RBP25.14■■□□□ 1.61
OTUB1-211ENST00000543004 MRIQ9BWK5 157 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 TAF1DQ9H5J8 278 aaPredicted RBP25.14■■□□□ 1.61
OTUB1-211ENST00000543004 ADARB2Q9NS39 739 aaKnown RBP25.14■■□□□ 1.61
OTUB1-211ENST00000543004 ECM29Q5VYK3 1845 aa25.14■■□□□ 1.61
OTUB1-211ENST00000543004 SPDYE2BA6NHP3 402 aa25.13■■□□□ 1.61
OTUB1-211ENST00000543004 WNT10BO00744 389 aa25.13■■□□□ 1.61
OTUB1-211ENST00000543004 SPDYE6P0CI01 402 aa25.13■■□□□ 1.61
OTUB1-211ENST00000543004 DYNLL1P63167 89 aaKnown RBP25.13■■□□□ 1.61
OTUB1-211ENST00000543004 FAM163AQ96GL9 167 aaPredicted RBP25.13■■□□□ 1.61
OTUB1-211ENST00000543004 ZBED3Q96IU2 234 aaPredicted RBP25.13■■□□□ 1.61
OTUB1-211ENST00000543004 FAM227BQ96M60 508 aa25.13■■□□□ 1.61
OTUB1-211ENST00000543004 AATFQ9NY61 560 aaKnown RBP eCLIP25.13■■□□□ 1.61
OTUB1-211ENST00000543004 IQCA1LA6NCM1 817 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 BTDP43251 543 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 UBE3CQ15386 1083 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 ZSCAN25Q6NSZ9 544 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 OSBP2Q969R2 916 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 PUS7LQ9H0K6 701 aaKnown RBP25.12■■□□□ 1.61
OTUB1-211ENST00000543004 CDK5RAP2Q96SN8 1893 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 POLR2AP24928 1970 aaKnown RBP25.12■■□□□ 1.61
OTUB1-211ENST00000543004 LDHCP07864 332 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 SLF2Q8IX21 1173 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 MTMR14Q8NCE2 650 aa25.12■■□□□ 1.61
OTUB1-211ENST00000543004 TDRD3Q9H7E2 651 aaKnown RBP25.12■■□□□ 1.61
OTUB1-211ENST00000543004 GPR75-ASB3A0A0A6YYF3 556 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms