RNA–Protein interactions for RNA: ENST00000541419.1

AC079949.1-201, humanhuman

TSL 3 BASIC

Gene AC079949.1, Length 505 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079949.1-201ENST00000541419 GTF2A2P52657 109 aa16.39■□□□□ 0.21
AC079949.1-201ENST00000541419 VGLL4Q14135 290 aa16.39■□□□□ 0.21
AC079949.1-201ENST00000541419 SLC4A8Q2Y0W8 1093 aa16.39■□□□□ 0.21
AC079949.1-201ENST00000541419 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
AC079949.1-201ENST00000541419 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
AC079949.1-201ENST00000541419 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 H0YGN5 161 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 OTUD5Q96G74 571 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
AC079949.1-201ENST00000541419 MYCP01106 439 aaPredicted RBP16.37■□□□□ 0.21
AC079949.1-201ENST00000541419 FAM84BQ96KN1 310 aaPredicted RBP16.37■□□□□ 0.21
AC079949.1-201ENST00000541419 ZSWIM8A7E2V4 1837 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 F6X3S4 739 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 HIBADHP31937 336 aaKnown RBP16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 CRKP46108 304 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 GYG1P46976 350 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 SH3TC2Q8TF17 1288 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 ARHGAP39Q9C0H5 1083 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 CSADQ9Y600 493 aa16.36■□□□□ 0.21
AC079949.1-201ENST00000541419 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
AC079949.1-201ENST00000541419 TLR2O60603 784 aa16.35■□□□□ 0.21
AC079949.1-201ENST00000541419 VAMP4O75379 141 aa16.35■□□□□ 0.21
AC079949.1-201ENST00000541419 LACTBP83111 547 aaPredicted RBP16.35■□□□□ 0.21
AC079949.1-201ENST00000541419 GRIK5Q16478 980 aa16.35■□□□□ 0.21
AC079949.1-201ENST00000541419 ARAP2Q8WZ64 1704 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 TNNI2P48788 182 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 SNCAIPQ9Y6H5 919 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 IL16Q14005 1332 aa16.34■□□□□ 0.21
AC079949.1-201ENST00000541419 CETPP11597 493 aa16.33■□□□□ 0.2
AC079949.1-201ENST00000541419 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
AC079949.1-201ENST00000541419 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
AC079949.1-201ENST00000541419 GRM8O00222 908 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 IRF6O14896 467 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 GNRH1P01148 92 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 CACNB3P54284 484 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 KIF22Q14807 665 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 PUS3Q9BZE2 481 aaKnown RBP16.32■□□□□ 0.2
AC079949.1-201ENST00000541419 CTGFP29279 349 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 PRMT2P55345 433 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 MTFR1Q15390 333 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 RIPOR2Q9Y4F9 1068 aa16.31■□□□□ 0.2
AC079949.1-201ENST00000541419 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
AC079949.1-201ENST00000541419 PPIL2Q13356 520 aa16.3■□□□□ 0.2
AC079949.1-201ENST00000541419 WRNIP1Q96S55 665 aa16.3■□□□□ 0.2
AC079949.1-201ENST00000541419 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
AC079949.1-201ENST00000541419 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 DPF3Q92784 378 aa16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 RBM27Q9P2N5 1060 aaKnown RBP16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
AC079949.1-201ENST00000541419 PSMC4P43686 418 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 FKBP1CQ5VVH2 108 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 APOBEC3HQ6NTF7 200 aaKnown RBP16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 ZDHHC15Q96MV8 337 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 CPA4Q9UI42 421 aa16.28■□□□□ 0.2
AC079949.1-201ENST00000541419 A0A0C4DFX4 3053 aa16.27■□□□□ 0.2
AC079949.1-201ENST00000541419 PPATQ06203 517 aa16.27■□□□□ 0.2
AC079949.1-201ENST00000541419 UBE2Q1Q7Z7E8 422 aa16.27■□□□□ 0.2
AC079949.1-201ENST00000541419 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
AC079949.1-201ENST00000541419 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
AC079949.1-201ENST00000541419 AK9Q5TCS8 1911 aa16.27■□□□□ 0.19
AC079949.1-201ENST00000541419 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 ALDH1L1O75891 902 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 OSBPP22059 807 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 INPP5BP32019 993 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 MIGA2Q7L4E1 593 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 HOOK2Q96ED9 719 aa16.26■□□□□ 0.19
AC079949.1-201ENST00000541419 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms