RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CCL15-CCL14A0A0B4J2E2 113 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 FRAT2O75474 233 aaPredicted RBP15.49■□□□□ 0.07
SNHG1-216ENST00000541416 ALDH1L1O75891 902 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 MAP3K9P80192 1104 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 CCL15Q16663 113 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 TBC1D22AQ8WUA7 517 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 ZNF594Q96JF6 807 aaPredicted RBP15.49■□□□□ 0.07
SNHG1-216ENST00000541416 PTPN18Q99952 460 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 TMOD2Q9NZR1 351 aa15.49■□□□□ 0.07
SNHG1-216ENST00000541416 TCP10L2B9ZVM9 353 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 F6X3S4 739 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 CRKP46108 304 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
SNHG1-216ENST00000541416 SLC4A8Q2Y0W8 1093 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 CAVIN4Q5BKX8 364 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
SNHG1-216ENST00000541416 ZCCHC17Q9NP64 241 aaKnown RBP15.48■□□□□ 0.07
SNHG1-216ENST00000541416 MROH5Q6ZUA9 1318 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 EN2P19622 333 aaPredicted RBP15.47■□□□□ 0.07
SNHG1-216ENST00000541416 GYG1P46976 350 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 HDLBPQ00341 1268 aaKnown RBP15.47■□□□□ 0.07
SNHG1-216ENST00000541416 VGLL4Q14135 290 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.47■□□□□ 0.07
SNHG1-216ENST00000541416 BRI3BPQ8WY22 251 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 ZNF333Q96JL9 665 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 SRCIN1Q9C0H9 1055 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
SNHG1-216ENST00000541416 KIAA0100Q14667 2235 aaKnown RBP15.47■□□□□ 0.07
SNHG1-216ENST00000541416 AOX1Q06278 1338 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 ARAP2Q8WZ64 1704 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 GNRH1P01148 92 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 CETPP11597 493 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 SLC4A10Q6U841 1118 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNHG1-216ENST00000541416 TEKT1Q969V4 418 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 FAM84BQ96KN1 310 aaPredicted RBP15.46■□□□□ 0.07
SNHG1-216ENST00000541416 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 TMEM39BQ9GZU3 492 aa15.46■□□□□ 0.07
SNHG1-216ENST00000541416 MAST3O60307 1309 aa15.45■□□□□ 0.06
SNHG1-216ENST00000541416 PRMT2P55345 433 aa15.45■□□□□ 0.06
SNHG1-216ENST00000541416 EPHA10Q5JZY3 1008 aa15.45■□□□□ 0.06
SNHG1-216ENST00000541416 ERO1BQ86YB8 467 aa15.45■□□□□ 0.06
SNHG1-216ENST00000541416 SPDYE5A6NIY4 337 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 TLR2O60603 784 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
SNHG1-216ENST00000541416 SNAPC2Q13487 334 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 FAM83AQ86UY5 434 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 MRS2Q9HD23 443 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 SALL2Q9Y467 1007 aaPredicted RBP15.44■□□□□ 0.06
SNHG1-216ENST00000541416 PTCH2Q9Y6C5 1203 aa15.44■□□□□ 0.06
SNHG1-216ENST00000541416 METTL24Q5JXM2 366 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 FKBP1CQ5VVH2 108 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 WRNIP1Q96S55 665 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
SNHG1-216ENST00000541416 FBXO33Q7Z6M2 555 aa15.42■□□□□ 0.06
SNHG1-216ENST00000541416 ZDHHC15Q96MV8 337 aa15.42■□□□□ 0.06
SNHG1-216ENST00000541416 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
SNHG1-216ENST00000541416 HOXD10P28358 340 aa15.41■□□□□ 0.06
SNHG1-216ENST00000541416 LACTBP83111 547 aaPredicted RBP15.41■□□□□ 0.06
SNHG1-216ENST00000541416 PPIL2Q13356 520 aa15.41■□□□□ 0.06
SNHG1-216ENST00000541416 CCDC184Q52MB2 194 aa15.41■□□□□ 0.06
SNHG1-216ENST00000541416 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
SNHG1-216ENST00000541416 SUCLG2Q96I99 432 aa15.41■□□□□ 0.06
SNHG1-216ENST00000541416 PUS3Q9BZE2 481 aaKnown RBP15.41■□□□□ 0.06
SNHG1-216ENST00000541416 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
SNHG1-216ENST00000541416 PDE8BO95263 885 aa15.4■□□□□ 0.06
SNHG1-216ENST00000541416 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
SNHG1-216ENST00000541416 PPATQ06203 517 aa15.4■□□□□ 0.06
SNHG1-216ENST00000541416 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
SNHG1-216ENST00000541416 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
SNHG1-216ENST00000541416 RPAP1Q9BWH6 1393 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-216ENST00000541416 BTBD19C9JJ37 291 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 IRF6O14896 467 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-216ENST00000541416 CACNB3P54284 484 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 HHIPL2Q6UWX4 724 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 NKX2-3Q8TAU0 364 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 ZKSCAN4Q969J2 545 aaPredicted RBP15.39■□□□□ 0.05
SNHG1-216ENST00000541416 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
SNHG1-216ENST00000541416 UTYO14607 1347 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 KIF16BQ96L93 1317 aa15.39■□□□□ 0.05
SNHG1-216ENST00000541416 MYCP01106 439 aaPredicted RBP15.38■□□□□ 0.05
SNHG1-216ENST00000541416 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
SNHG1-216ENST00000541416 FXR1P51114 621 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNHG1-216ENST00000541416 CAP1Q01518 475 aa15.38■□□□□ 0.05
SNHG1-216ENST00000541416 PUM3Q15397 648 aaKnown RBP15.38■□□□□ 0.05
SNHG1-216ENST00000541416 RABL6Q3YEC7 729 aaPredicted RBP15.38■□□□□ 0.05
SNHG1-216ENST00000541416 WDR66Q8TBY9 1149 aa15.38■□□□□ 0.05
SNHG1-216ENST00000541416 SH3TC2Q8TF17 1288 aa15.38■□□□□ 0.05
SNHG1-216ENST00000541416 ANP32CO43423 234 aa15.37■□□□□ 0.05
SNHG1-216ENST00000541416 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
SNHG1-216ENST00000541416 ANKRD23Q86SG2 305 aa15.37■□□□□ 0.05
SNHG1-216ENST00000541416 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
SNHG1-216ENST00000541416 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
SNHG1-216ENST00000541416 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms