RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 MS4A4AQ96JQ5 239 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 PRMT6Q96LA8 375 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-219ENST00000539952 MPHOSPH8Q99549 860 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 GREM2Q9H772 168 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 RYDENQ9NUL5 291 aaKnown RBP7.61□□□□□ -1.19
CPSF7-219ENST00000539952 FZD1Q9UP38 647 aa7.61□□□□□ -1.19
CPSF7-219ENST00000539952 COL1A1P02452 1464 aaPredicted RBP7.61□□□□□ -1.19
CPSF7-219ENST00000539952 H7C1W4 665 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 ZNF853P0CG23 659 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 HOXD10P28358 340 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 GNAI1P63096 354 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 MAP3K9P80192 1104 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 CALD1Q05682 793 aaKnown RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 RASA3Q14644 834 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 CFAP100Q494V2 611 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 C15orf52Q6ZUT6 534 aaKnown RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 HELBQ8NG08 1087 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 HTATIP2Q9BUP3 242 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 ZCCHC17Q9NP64 241 aaKnown RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 MAP3K2Q9Y2U5 619 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
CPSF7-219ENST00000539952 NR2E3Q9Y5X4 410 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 PTCH2Q9Y6C5 1203 aa7.6□□□□□ -1.19
CPSF7-219ENST00000539952 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 DDX60Q8IY21 1712 aaKnown RBP7.59□□□□□ -1.19
CPSF7-219ENST00000539952 PI4KAP2A4QPH2 592 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-219ENST00000539952 TLR2O60603 784 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 CSF1RP07333 972 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 GJA5P36382 358 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 RBM5P52756 815 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPSF7-219ENST00000539952 PI4KAP1Q8N8J0 262 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 OPTNQ96CV9 577 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 PLA2G12BQ9BX93 195 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 ELP3Q9H9T3 547 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 VEZTQ9HBM0 779 aa7.59□□□□□ -1.19
CPSF7-219ENST00000539952 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 A0A1W2PPC1 479 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CLRN2A0PK11 232 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CETPP11597 493 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 IL1R1P14778 569 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 ITGA6P23229 1130 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 TNNI2P48788 182 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 LACTBP83111 547 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CHRNDQ07001 517 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CCL15Q16663 113 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.58□□□□□ -1.2
CPSF7-219ENST00000539952 ZNF804AQ7Z570 1209 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CCDC146Q8IYE0 955 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 FBXO22Q8NEZ5 403 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 IFT57Q9NWB7 429 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
CPSF7-219ENST00000539952 CSADQ9Y600 493 aa7.58□□□□□ -1.2
CPSF7-219ENST00000539952 ANKRD18BA2A2Z9 1011 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 F8W031 263 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-219ENST00000539952 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 CAP1Q01518 475 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-219ENST00000539952 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 CERS5Q8N5B7 392 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 HOOK2Q96ED9 719 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 BMP2KQ9NSY1 1161 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-219ENST00000539952 ZNF70Q9UC06 446 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-219ENST00000539952 SERPINA10Q9UK55 444 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 ADAMTS8Q9UP79 889 aa7.57□□□□□ -1.2
CPSF7-219ENST00000539952 TTLL13PA6NNM8 815 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 NEURL1BA8MQ27 555 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 MYCP01106 439 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-219ENST00000539952 GJB1P08034 283 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 GJA8P48165 433 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 UBXN2AP68543 259 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 C17orf99Q6UX52 265 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 UBE3BQ7Z3V4 1068 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 C8orf58Q8NAV2 365 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 SH3TC2Q8TF17 1288 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 MRIQ9BWK5 157 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 PPP4R2Q9NY27 417 aa7.56□□□□□ -1.2
CPSF7-219ENST00000539952 TRIOBPQ9H2D6 2365 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 PSME4Q14997 1843 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 COL4A1P02462 1669 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 SPDYE5A6NIY4 337 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 TAF5LO75529 589 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 KLRK1P26718 216 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 GRK4P32298 578 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 PSMC4P43686 418 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 HDLBPQ00341 1268 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 IFIT5Q13325 482 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 GCKRQ14397 625 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 CWF19L2Q2TBE0 894 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms