RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
CHKA-207ENST00000533728 HTTP42858 3142 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 HSP90B1P14625 803 aaKnown RBP11.49□□□□□ -0.57
CHKA-207ENST00000533728 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
CHKA-207ENST00000533728 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 ZMYM1Q5SVZ6 1142 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 CCDC24Q8N4L8 307 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 JARID2Q92833 1246 aaPredicted RBP11.49□□□□□ -0.57
CHKA-207ENST00000533728 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
CHKA-207ENST00000533728 CHMP3Q9Y3E7 222 aa11.49□□□□□ -0.57
CHKA-207ENST00000533728 RTCBQ9Y3I0 505 aaKnown RBP11.49□□□□□ -0.57
CHKA-207ENST00000533728 MUC3AQ02505 3323 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 A0A1B0GUL7 405 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 H0YGN5 161 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 TRAF5O00463 557 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 TRPA1O75762 1119 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 ZSCAN22P10073 491 aaPredicted RBP11.48□□□□□ -0.57
CHKA-207ENST00000533728 PDCP20941 246 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 EIF5P55010 431 aaKnown RBP11.48□□□□□ -0.57
CHKA-207ENST00000533728 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
CHKA-207ENST00000533728 ADCK5Q3MIX3 580 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 CCDC158Q5M9N0 1113 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHKA-207ENST00000533728 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
CHKA-207ENST00000533728 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
CHKA-207ENST00000533728 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 STX6O43752 255 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 PDE8AO60658 829 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 RFC4P35249 363 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 DDR1Q08345 913 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 GZF1Q9H116 711 aaPredicted RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 RIPOR2Q9Y4F9 1068 aa11.47□□□□□ -0.57
CHKA-207ENST00000533728 LAMA2P24043 3122 aaKnown RBP11.47□□□□□ -0.57
CHKA-207ENST00000533728 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.57
CHKA-207ENST00000533728 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.57
CHKA-207ENST00000533728 SYT1P21579 422 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 CTSWP56202 376 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 PARP10Q53GL7 1025 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 NEUROD6Q96NK8 337 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 NEK1Q96PY6 1258 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 DNAJC2Q99543 621 aaKnown RBP11.46□□□□□ -0.57
CHKA-207ENST00000533728 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 RNF186Q9NXI6 227 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.57
CHKA-207ENST00000533728 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 F13A1P00488 732 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 TIMM10P62072 90 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 ME3Q16798 604 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 TAF7LQ5H9L4 462 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 FBXO46Q6PJ61 603 aaPredicted RBP11.45□□□□□ -0.58
CHKA-207ENST00000533728 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
CHKA-207ENST00000533728 FAM43AQ8N2R8 423 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 RGS22Q8NE09 1264 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 XAGE2Q96GT9 111 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 LLPHQ9BRT6 129 aaKnown RBP11.45□□□□□ -0.58
CHKA-207ENST00000533728 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 CTNNA3Q9UI47 895 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 HDAC9Q9UKV0 1011 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 BRPF3Q9ULD4 1205 aa11.45□□□□□ -0.58
CHKA-207ENST00000533728 MROH5Q6ZUA9 1318 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 GOLIM4O00461 696 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 LETM1O95202 739 aaPredicted RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 GJB2P29033 226 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 HLFQ16534 295 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 ZSCAN23Q3MJ62 389 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 TTC39AQ5SRH9 613 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 DDX46Q7L014 1031 aaKnown RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 VGLL2Q8N8G2 317 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 EDC3Q96F86 508 aaKnown RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 ZNF594Q96JF6 807 aaPredicted RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 PUS3Q9BZE2 481 aaKnown RBP11.44□□□□□ -0.58
CHKA-207ENST00000533728 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
CHKA-207ENST00000533728 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 CELF2O95319 508 aaKnown RBP11.43□□□□□ -0.58
CHKA-207ENST00000533728 LARGE1O95461 756 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 UQCRFS1P1P0C7P4 283 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 ITGA6P23229 1130 aa11.43□□□□□ -0.58
CHKA-207ENST00000533728 TOB2Q14106 344 aaPredicted RBP11.43□□□□□ -0.58
CHKA-207ENST00000533728 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms