RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 COL4A5P29400 1685 aa7.7□□□□□ -1.18
ATPAF1-207ENST00000525633 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 TMEM88BA6NKF7 163 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 RNF113AO15541 343 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 IDH1O75874 414 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 CHMLP26374 656 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 EIF6P56537 245 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 MAP1SQ66K74 1059 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 TTLL5Q6EMB2 1281 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 CASC1Q6TDU7 716 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 NIM1KQ8IY84 436 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 WDR66Q8TBY9 1149 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 MXD3Q9BW11 206 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 VPS33BQ9H267 617 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 POLR2AP24928 1970 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 PDS5AQ29RF7 1337 aaKnown RBP7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 FAM205AQ6ZU69 1335 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 ADAMTSL1Q8N6G6 1762 aa7.69□□□□□ -1.18
ATPAF1-207ENST00000525633 MYH1P12882 1939 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 USP17L3A6NCW0 530 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 USP17L4A6NCW7 530 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 HIP1O00291 1037 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 RAD17O75943 681 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 CHGBP05060 677 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 PDE6AP16499 860 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 MAP3K12Q12852 859 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 NMIQ13287 307 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 C8orf34Q49A92 452 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 SLC9C2Q5TAH2 1124 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 SPTY2D1Q68D10 685 aaPredicted RBP7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 ZSCAN25Q6NSZ9 544 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 CWC27Q6UX04 472 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 USP17L1Q7RTZ2 530 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 PODNQ7Z5L7 613 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 ZGPATQ8N5A5 531 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 MAGEB6Q8N7X4 407 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
ATPAF1-207ENST00000525633 A0A0D9SFI3 127 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 YDJCA8MPS7 323 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 F8W031 263 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 LDHBP07195 334 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 CYP7A1P22680 504 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 EPS15P42566 896 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 VEGFBP49765 207 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 SCNN1DP51172 638 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 GRIK5Q16478 980 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 MFSD14BQ5SR56 506 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 NAA16Q6N069 864 aaPredicted RBP7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 DZIP1Q86YF9 867 aaKnown RBP7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 TBC1D22AQ8WUA7 517 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 RUFY2Q8WXA3 655 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 FAM227BQ96M60 508 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 BACH2Q9BYV9 841 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 ZNF532Q9HCE3 1301 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 SALL1Q9NSC2 1324 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 CNTNAP1P78357 1384 aa7.67□□□□□ -1.18
ATPAF1-207ENST00000525633 WDR90Q96KV7 1748 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 FOCADQ5VW36 1801 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 RASSF10A6NK89 507 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 PSMD14O00487 310 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 ZBTB22O15209 634 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 SEC24BO95487 1268 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 ZFYP08048 801 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 PRDX5P30044 214 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 ADD2P35612 726 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 MECOMQ03112 1051 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 CXCL9Q07325 125 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 MCMDC2Q4G0Z9 681 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 DACT2Q5SW24 774 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 STRIP1Q5VSL9 837 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 CCDC129Q6ZRS4 1044 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 USP50Q70EL3 339 aaPredicted RBP7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 CERS5Q8N5B7 392 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 SEC62Q99442 399 aaKnown RBP7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 ESYT1Q9BSJ8 1104 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 HELLSQ9NRZ9 838 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 RFX7Q2KHR2 1363 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 LAMA4Q16363 1823 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 MYH8P13535 1937 aa7.66□□□□□ -1.18
ATPAF1-207ENST00000525633 TCRBV5S4A2TA0A5A2 114 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 M0R2C6 588 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 FOXN1O15353 648 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 CAPN15O75808 1086 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 LDHCP07864 332 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 GSTO1P78417 241 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 TNIP1Q15025 636 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 UBE3CQ15386 1083 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 DEFB115Q30KQ5 88 aa7.65□□□□□ -1.18
ATPAF1-207ENST00000525633 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms