RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.39■■□□□ 1.01
CCNC-213ENST00000523541 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.01
CCNC-213ENST00000523541 TNNQ9UQP3 1299 aa21.39■■□□□ 1.01
CCNC-213ENST00000523541 UNCXA6NJT0 531 aa21.38■■□□□ 1.01
CCNC-213ENST00000523541 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
CCNC-213ENST00000523541 TNFAIP1Q13829 316 aa21.38■■□□□ 1.01
CCNC-213ENST00000523541 ZIC5Q96T25 663 aa21.38■■□□□ 1.01
CCNC-213ENST00000523541 FAM155AB1AL88 458 aaPredicted RBP21.37■■□□□ 1.01
CCNC-213ENST00000523541 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
CCNC-213ENST00000523541 SLC10A3P09131 477 aa21.37■■□□□ 1.01
CCNC-213ENST00000523541 SUPT20HL1Q3ZLR7 823 aa21.37■■□□□ 1.01
CCNC-213ENST00000523541 ARMC9Q7Z3E5 817 aa21.37■■□□□ 1.01
CCNC-213ENST00000523541 PCDHAC2Q9Y5I4 1007 aa21.37■■□□□ 1.01
CCNC-213ENST00000523541 CRKP46108 304 aa21.36■■□□□ 1.01
CCNC-213ENST00000523541 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
CCNC-213ENST00000523541 G3BP1Q13283 466 aaKnown RBP eCLIP21.36■■□□□ 1.01
CCNC-213ENST00000523541 TEKT1Q969V4 418 aa21.36■■□□□ 1.01
CCNC-213ENST00000523541 DENND2AQ9ULE3 1009 aa21.36■■□□□ 1.01
CCNC-213ENST00000523541 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
CCNC-213ENST00000523541 HHIPL2Q6UWX4 724 aa21.35■■□□□ 1.01
CCNC-213ENST00000523541 RASAL3Q86YV0 1011 aa21.35■■□□□ 1.01
CCNC-213ENST00000523541 ITPRIPQ8IWB1 547 aa21.35■■□□□ 1.01
CCNC-213ENST00000523541 SALL1Q9NSC2 1324 aa21.34■■□□□ 1.01
CCNC-213ENST00000523541 PPP1R12BO60237 982 aaPredicted RBP21.34■■□□□ 1.01
CCNC-213ENST00000523541 POLA2Q14181 598 aa21.34■■□□□ 1.01
CCNC-213ENST00000523541 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
CCNC-213ENST00000523541 SSH3Q8TE77 659 aa21.34■■□□□ 1.01
CCNC-213ENST00000523541 ZDHHC15Q96MV8 337 aa21.34■■□□□ 1.01
CCNC-213ENST00000523541 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
CCNC-213ENST00000523541 PDS5AQ29RF7 1337 aaKnown RBP21.33■■□□□ 1.01
CCNC-213ENST00000523541 PNMA6EA0A0J9YXQ4 647 aa21.33■■□□□ 1.01
CCNC-213ENST00000523541 TNNI2P48788 182 aa21.33■■□□□ 1.01
CCNC-213ENST00000523541 MVPQ14764 893 aaKnown RBP21.33■■□□□ 1.01
CCNC-213ENST00000523541 MAP3K11Q16584 847 aa21.33■■□□□ 1.01
CCNC-213ENST00000523541 FKBP1CQ5VVH2 108 aa21.33■■□□□ 1.01
CCNC-213ENST00000523541 ZNF70Q9UC06 446 aaPredicted RBP21.33■■□□□ 1.01
CCNC-213ENST00000523541 A0A1B0GUL7 405 aa21.32■■□□□ 1
CCNC-213ENST00000523541 RLBP1P12271 317 aa21.32■■□□□ 1
CCNC-213ENST00000523541 TIMM10P62072 90 aa21.32■■□□□ 1
CCNC-213ENST00000523541 TFCP2Q12800 502 aa21.32■■□□□ 1
CCNC-213ENST00000523541 MKRN3Q13064 507 aaKnown RBP21.32■■□□□ 1
CCNC-213ENST00000523541 LDLRAD1Q5T700 205 aa21.32■■□□□ 1
CCNC-213ENST00000523541 CCDC102BQ68D86 513 aa21.32■■□□□ 1
CCNC-213ENST00000523541 CHMP4BQ9H444 224 aaKnown RBP21.32■■□□□ 1
CCNC-213ENST00000523541 GPR108Q9NPR9 543 aa21.32■■□□□ 1
CCNC-213ENST00000523541 ECM29Q5VYK3 1845 aa21.32■■□□□ 1
CCNC-213ENST00000523541 TRPA1O75762 1119 aa21.31■■□□□ 1
CCNC-213ENST00000523541 RASA3Q14644 834 aa21.31■■□□□ 1
CCNC-213ENST00000523541 TDRD3Q9H7E2 651 aaKnown RBP21.31■■□□□ 1
CCNC-213ENST00000523541 ARAP2Q8WZ64 1704 aa21.3■■□□□ 1
CCNC-213ENST00000523541 GRIK5Q16478 980 aa21.3■■□□□ 1
CCNC-213ENST00000523541 XAGE2Q96GT9 111 aa21.3■■□□□ 1
CCNC-213ENST00000523541 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
CCNC-213ENST00000523541 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
CCNC-213ENST00000523541 FZD1Q9UP38 647 aa21.3■■□□□ 1
CCNC-213ENST00000523541 NOP58Q9Y2X3 529 aaKnown RBP21.3■■□□□ 1
CCNC-213ENST00000523541 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
CCNC-213ENST00000523541 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
CCNC-213ENST00000523541 PHKA1P46020 1223 aa21.29■■□□□ 1
CCNC-213ENST00000523541 FAM83AQ86UY5 434 aa21.29■■□□□ 1
CCNC-213ENST00000523541 CSRNP1Q96S65 589 aa21.29■■□□□ 1
CCNC-213ENST00000523541 TMOD2Q9NZR1 351 aa21.29■■□□□ 1
CCNC-213ENST00000523541 SPTY2D1Q68D10 685 aaPredicted RBP21.28■■□□□ 1
CCNC-213ENST00000523541 APOBEC3HQ6NTF7 200 aaKnown RBP21.28■■□□□ 1
CCNC-213ENST00000523541 HOOK2Q96ED9 719 aa21.28■■□□□ 1
CCNC-213ENST00000523541 NEUROD6Q96NK8 337 aa21.28■■□□□ 1
CCNC-213ENST00000523541 RNF186Q9NXI6 227 aa21.28■■□□□ 1
CCNC-213ENST00000523541 AOX1Q06278 1338 aa21.28■■□□□ 1
CCNC-213ENST00000523541 ADORA1P30542 326 aa21.27■■□□□ 1
CCNC-213ENST00000523541 IREB2P48200 963 aaKnown RBP21.27■■□□□ 1
CCNC-213ENST00000523541 GORABQ5T7V8 394 aa21.27■■□□□ 1
CCNC-213ENST00000523541 NBPF12Q5TAG4 269 aaPredicted RBP21.27■■□□□ 1
CCNC-213ENST00000523541 SLF2Q8IX21 1173 aa21.27■■□□□ 1
CCNC-213ENST00000523541 SLC10A4Q96EP9 437 aa21.27■■□□□ 1
CCNC-213ENST00000523541 DDX19BQ9UMR2 479 aa21.27■■□□□ 1
CCNC-213ENST00000523541 AKAP11Q9UKA4 1901 aa21.27■■□□□ 1
CCNC-213ENST00000523541 MYH13Q9UKX3 1938 aa21.26■□□□□ 0.99
CCNC-213ENST00000523541 IGSF3O75054 1194 aa21.26■□□□□ 0.99
CCNC-213ENST00000523541 SURF6O75683 361 aaKnown RBP21.26■□□□□ 0.99
CCNC-213ENST00000523541 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.26■□□□□ 0.99
CCNC-213ENST00000523541 PANK1Q8TE04 598 aa21.26■□□□□ 0.99
CCNC-213ENST00000523541 UQCRFS1P1P0C7P4 283 aa21.25■□□□□ 0.99
CCNC-213ENST00000523541 INHBEP58166 350 aa21.25■□□□□ 0.99
CCNC-213ENST00000523541 SREBF2Q12772 1141 aa21.25■□□□□ 0.99
CCNC-213ENST00000523541 FAM163AQ96GL9 167 aaPredicted RBP21.25■□□□□ 0.99
CCNC-213ENST00000523541 USP2O75604 605 aaPredicted RBP21.24■□□□□ 0.99
CCNC-213ENST00000523541 PRDX5P30044 214 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 TM4SF4P48230 202 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 OS9Q13438 667 aaPredicted RBP21.24■□□□□ 0.99
CCNC-213ENST00000523541 RASGRF1Q13972 1273 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 PDE3AQ14432 1141 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 RPAP2Q8IXW5 612 aaPredicted RBP21.24■□□□□ 0.99
CCNC-213ENST00000523541 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 ABHD8Q96I13 439 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 TEPSINQ96N21 525 aa21.24■□□□□ 0.99
CCNC-213ENST00000523541 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
CCNC-213ENST00000523541 ZBTB48P10074 688 aaPredicted RBP21.23■□□□□ 0.99
CCNC-213ENST00000523541 ARID4AP29374 1257 aaPredicted RBP21.23■□□□□ 0.99
CCNC-213ENST00000523541 CACNB3P54284 484 aa21.23■□□□□ 0.99
CCNC-213ENST00000523541 DGKZQ13574 1117 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms