RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 TDRD3Q9H7E2 651 aaKnown RBP15.43■□□□□ 0.06
VEGFA-223ENST00000523125 VEZTQ9HBM0 779 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 RNF186Q9NXI6 227 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 SAGE1Q9NXZ1 904 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 CEP126Q9P2H0 1117 aa15.43■□□□□ 0.06
VEGFA-223ENST00000523125 ZNF70Q9UC06 446 aaPredicted RBP15.43■□□□□ 0.06
VEGFA-223ENST00000523125 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
VEGFA-223ENST00000523125 HDLBPQ00341 1268 aaKnown RBP15.42■□□□□ 0.06
VEGFA-223ENST00000523125 RASA3Q14644 834 aa15.42■□□□□ 0.06
VEGFA-223ENST00000523125 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
VEGFA-223ENST00000523125 ATP2B3Q16720 1220 aa15.42■□□□□ 0.06
VEGFA-223ENST00000523125 NBPF12Q5TAG4 269 aaPredicted RBP15.42■□□□□ 0.06
VEGFA-223ENST00000523125 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
VEGFA-223ENST00000523125 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
VEGFA-223ENST00000523125 ANGEL1Q9UNK9 670 aaKnown RBP15.42■□□□□ 0.06
VEGFA-223ENST00000523125 TRPA1O75762 1119 aa15.41■□□□□ 0.06
VEGFA-223ENST00000523125 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-223ENST00000523125 MRIQ9BWK5 157 aa15.41■□□□□ 0.06
VEGFA-223ENST00000523125 MYH2Q9UKX2 1941 aa15.41■□□□□ 0.06
VEGFA-223ENST00000523125 SRGAP3O43295 1099 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 SUPT20HL1Q3ZLR7 823 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 CDAN1Q8IWY9 1227 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 TMEM57Q8N5G2 664 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 ZDHHC15Q96MV8 337 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 TEPSINQ96N21 525 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-223ENST00000523125 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
VEGFA-223ENST00000523125 PPP1R12BO60237 982 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-223ENST00000523125 USP2O75604 605 aaPredicted RBP15.39■□□□□ 0.05
VEGFA-223ENST00000523125 ADORA1P30542 326 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 PHKA1P46020 1223 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 TM4SF4P48230 202 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
VEGFA-223ENST00000523125 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 APOBEC3HQ6NTF7 200 aaKnown RBP15.39■□□□□ 0.05
VEGFA-223ENST00000523125 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 TEKT1Q969V4 418 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
VEGFA-223ENST00000523125 PNMA6EA0A0J9YXQ4 647 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 TCP10L2B9ZVM9 353 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 ZBTB22O15209 634 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 GNAI2P04899 355 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 TIMM10P62072 90 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 TNFAIP1Q13829 316 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 HHIPL2Q6UWX4 724 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
VEGFA-223ENST00000523125 UNCXA6NJT0 531 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 CACNB3P54284 484 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 TFCP2Q12800 502 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 SLC10A4Q96EP9 437 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 TMEM39BQ9GZU3 492 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 MAST3O60307 1309 aa15.37■□□□□ 0.05
VEGFA-223ENST00000523125 RLBP1P12271 317 aa15.36■□□□□ 0.05
VEGFA-223ENST00000523125 PRDX5P30044 214 aa15.36■□□□□ 0.05
VEGFA-223ENST00000523125 CCDC102BQ68D86 513 aa15.36■□□□□ 0.05
VEGFA-223ENST00000523125 GNL3LQ9NVN8 582 aaKnown RBP15.36■□□□□ 0.05
VEGFA-223ENST00000523125 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
VEGFA-223ENST00000523125 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 SEMA3EO15041 775 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 GJA5P36382 358 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 IREB2P48200 963 aaKnown RBP15.35■□□□□ 0.05
VEGFA-223ENST00000523125 TNNI2P48788 182 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 XAGE2Q96GT9 111 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 MCOLN1Q9GZU1 580 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 DENND2AQ9ULE3 1009 aa15.35■□□□□ 0.05
VEGFA-223ENST00000523125 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-223ENST00000523125 RASGRF1Q13972 1273 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 DIXDC1Q155Q3 683 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 FAM83AQ86UY5 434 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 ANKRD13AQ8IZ07 590 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-223ENST00000523125 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
VEGFA-223ENST00000523125 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
VEGFA-223ENST00000523125 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-223ENST00000523125 TBC1D8O95759 1140 aa15.33■□□□□ 0.04
VEGFA-223ENST00000523125 LDHBP07195 334 aaKnown RBP15.33■□□□□ 0.04
VEGFA-223ENST00000523125 SREBF2Q12772 1141 aa15.33■□□□□ 0.04
VEGFA-223ENST00000523125 DGKZQ13574 1117 aa15.33■□□□□ 0.04
VEGFA-223ENST00000523125 POLA2Q14181 598 aa15.33■□□□□ 0.04
VEGFA-223ENST00000523125 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.33■□□□□ 0.04
VEGFA-223ENST00000523125 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
VEGFA-223ENST00000523125 MANSC4A6NHS7 340 aaPredicted RBP15.32■□□□□ 0.04
VEGFA-223ENST00000523125 ATP8B2P98198 1209 aa15.32■□□□□ 0.04
VEGFA-223ENST00000523125 CDC42EP5Q6NZY7 148 aa15.32■□□□□ 0.04
VEGFA-223ENST00000523125 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
VEGFA-223ENST00000523125 CFHR5Q9BXR6 569 aa15.32■□□□□ 0.04
VEGFA-223ENST00000523125 R3HDMLQ9H3Y0 253 aa15.32■□□□□ 0.04
VEGFA-223ENST00000523125 INHBEP58166 350 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
VEGFA-223ENST00000523125 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
VEGFA-223ENST00000523125 IFNL1Q8IU54 200 aa15.31■□□□□ 0.04
VEGFA-223ENST00000523125 FTSJ3Q8IY81 847 aaKnown RBP15.31■□□□□ 0.04
VEGFA-223ENST00000523125 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.042e-42■□□□□ 11.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms