RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ELP3Q9H9T3 547 aa18.75■□□□□ 0.59
PRKDC-204ENST00000521331 HDLBPQ00341 1268 aaKnown RBP18.74■□□□□ 0.59
PRKDC-204ENST00000521331 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
PRKDC-204ENST00000521331 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
PRKDC-204ENST00000521331 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
PRKDC-204ENST00000521331 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
PRKDC-204ENST00000521331 TCP10L2B9ZVM9 353 aa18.73■□□□□ 0.59
PRKDC-204ENST00000521331 FRAT2O75474 233 aaPredicted RBP18.73■□□□□ 0.59
PRKDC-204ENST00000521331 METTL24Q5JXM2 366 aa18.73■□□□□ 0.59
PRKDC-204ENST00000521331 PTPN18Q99952 460 aa18.73■□□□□ 0.59
PRKDC-204ENST00000521331 MAP3K9P80192 1104 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 SP3Q02447 781 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.72■□□□□ 0.59
PRKDC-204ENST00000521331 CD99L2Q8TCZ2 262 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 MS4A4AQ96JQ5 239 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 TMEM39BQ9GZU3 492 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 EFCC1Q9HA90 598 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 PTPN22Q9Y2R2 807 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 CSADQ9Y600 493 aa18.72■□□□□ 0.59
PRKDC-204ENST00000521331 LAMB1P07942 1786 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 PDE8BO95263 885 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 GTF2A2P52657 109 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 CHAF1AQ13111 956 aaPredicted RBP18.71■□□□□ 0.59
PRKDC-204ENST00000521331 CDAN1Q8IWY9 1227 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.71■□□□□ 0.59
PRKDC-204ENST00000521331 TEKT1Q969V4 418 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 MRIQ9BWK5 157 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 PTPRCP08575 1304 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 ZNF521Q96K83 1311 aa18.71■□□□□ 0.59
PRKDC-204ENST00000521331 ZNF316A6NFI3 1004 aaPredicted RBP18.7■□□□□ 0.58
PRKDC-204ENST00000521331 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
PRKDC-204ENST00000521331 VGLL4Q14135 290 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 ARHGEF6Q15052 776 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 LRRC24Q50LG9 513 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 MRPL50Q8N5N7 158 aaKnown RBP18.7■□□□□ 0.58
PRKDC-204ENST00000521331 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 IQSEC3Q9UPP2 1182 aaPredicted RBP18.7■□□□□ 0.58
PRKDC-204ENST00000521331 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 MAST3O60307 1309 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 KIF16BQ96L93 1317 aa18.7■□□□□ 0.58
PRKDC-204ENST00000521331 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 GRIK5Q16478 980 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 CCL15Q16663 113 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 ZDHHC15Q96MV8 337 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 ZFYVE28Q9HCC9 887 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
PRKDC-204ENST00000521331 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
PRKDC-204ENST00000521331 PUM3Q15397 648 aaKnown RBP18.68■□□□□ 0.58
PRKDC-204ENST00000521331 TAF1CQ15572 869 aaPredicted RBP18.68■□□□□ 0.58
PRKDC-204ENST00000521331 FKBP1CQ5VVH2 108 aa18.68■□□□□ 0.58
PRKDC-204ENST00000521331 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
PRKDC-204ENST00000521331 SPDYE5A6NIY4 337 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 IFIT1P09914 478 aaKnown RBP18.67■□□□□ 0.58
PRKDC-204ENST00000521331 BCAMP50895 628 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 GCC1Q96CN9 775 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 OTUD5Q96G74 571 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 HTTP42858 3142 aa18.67■□□□□ 0.58
PRKDC-204ENST00000521331 POTEFA5A3E0 1075 aa18.66■□□□□ 0.58
PRKDC-204ENST00000521331 OTOFQ9HC10 1997 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 E9PSI1 815 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 CETPP11597 493 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 FGFR2P21802 821 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 CACNB3P54284 484 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 APOBEC3HQ6NTF7 200 aaKnown RBP18.65■□□□□ 0.58
PRKDC-204ENST00000521331 HHIPL2Q6UWX4 724 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 ERO1BQ86YB8 467 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 USP44Q9H0E7 712 aa18.65■□□□□ 0.58
PRKDC-204ENST00000521331 ZCCHC17Q9NP64 241 aaKnown RBP18.65■□□□□ 0.58
PRKDC-204ENST00000521331 DCAF15Q66K64 600 aa18.64■□□□□ 0.57
PRKDC-204ENST00000521331 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
PRKDC-204ENST00000521331 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
PRKDC-204ENST00000521331 SNCAIPQ9Y6H5 919 aa18.64■□□□□ 0.57
PRKDC-204ENST00000521331 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
PRKDC-204ENST00000521331 EYA2O00167 538 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 SLC5A1P13866 664 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 CAP1Q01518 475 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 SNAPC2Q13487 334 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 NBPF11Q86T75 865 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 WDR66Q8TBY9 1149 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 LPIN2Q92539 896 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
PRKDC-204ENST00000521331 TLR2O60603 784 aa18.62■□□□□ 0.57
PRKDC-204ENST00000521331 PPIL2Q13356 520 aa18.62■□□□□ 0.57
PRKDC-204ENST00000521331 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
PRKDC-204ENST00000521331 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
PRKDC-204ENST00000521331 KIF22Q14807 665 aa18.61■□□□□ 0.57
PRKDC-204ENST00000521331 SLC9C1Q4G0N8 1177 aa18.61■□□□□ 0.57
PRKDC-204ENST00000521331 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
PRKDC-204ENST00000521331 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
PRKDC-204ENST00000521331 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
PRKDC-204ENST00000521331 BTBD19C9JJ37 291 aa18.6■□□□□ 0.57
PRKDC-204ENST00000521331 IRF6O14896 467 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms