RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CFHR5Q9BXR6 569 aa19.01■□□□□ 0.63
CSMD1-207ENST00000520451 TCP10L2B9ZVM9 353 aa19■□□□□ 0.63
CSMD1-207ENST00000520451 USP2O75604 605 aaPredicted RBP19■□□□□ 0.63
CSMD1-207ENST00000520451 ALDH1A1P00352 501 aa19■□□□□ 0.63
CSMD1-207ENST00000520451 IFIT1P09914 478 aaKnown RBP19■□□□□ 0.63
CSMD1-207ENST00000520451 INHBEP58166 350 aa19■□□□□ 0.63
CSMD1-207ENST00000520451 PUM3Q15397 648 aaKnown RBP19■□□□□ 0.63
CSMD1-207ENST00000520451 PKN2Q16513 984 aaKnown RBP19■□□□□ 0.63
CSMD1-207ENST00000520451 IFNL1Q8IU54 200 aa19■□□□□ 0.63
CSMD1-207ENST00000520451 R3HDMLQ9H3Y0 253 aa19■□□□□ 0.63
CSMD1-207ENST00000520451 FKTNO75072 461 aa18.99■□□□□ 0.63
CSMD1-207ENST00000520451 RFX5P48382 616 aaPredicted RBP18.99■□□□□ 0.63
CSMD1-207ENST00000520451 ANKRD13AQ8IZ07 590 aa18.99■□□□□ 0.63
CSMD1-207ENST00000520451 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
CSMD1-207ENST00000520451 HPS5Q9UPZ3 1129 aa18.99■□□□□ 0.63
CSMD1-207ENST00000520451 EYA2O00167 538 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 FGFR2P21802 821 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 TNNI2P48788 182 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
CSMD1-207ENST00000520451 CDAN1Q8IWY9 1227 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 TEKT1Q969V4 418 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 TEPSINQ96N21 525 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 TMEM39BQ9GZU3 492 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 KIF16BQ96L93 1317 aa18.98■□□□□ 0.63
CSMD1-207ENST00000520451 IGF2BP3O00425 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
CSMD1-207ENST00000520451 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
CSMD1-207ENST00000520451 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
CSMD1-207ENST00000520451 SLC5A1P13866 664 aa18.97■□□□□ 0.63
CSMD1-207ENST00000520451 GJA5P36382 358 aa18.97■□□□□ 0.63
CSMD1-207ENST00000520451 NOB1Q9ULX3 412 aaKnown RBP18.97■□□□□ 0.63
CSMD1-207ENST00000520451 LPIN2Q92539 896 aa18.96■□□□□ 0.63
CSMD1-207ENST00000520451 ELP3Q9H9T3 547 aa18.96■□□□□ 0.63
CSMD1-207ENST00000520451 CACNB3P54284 484 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 OPTNQ96CV9 577 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 API5Q9BZZ5 524 aaKnown RBP18.95■□□□□ 0.62
CSMD1-207ENST00000520451 SIL1Q9H173 461 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 TMOD2Q9NZR1 351 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 MAST3O60307 1309 aa18.95■□□□□ 0.62
CSMD1-207ENST00000520451 OTOFQ9HC10 1997 aa18.94■□□□□ 0.62
CSMD1-207ENST00000520451 OTUD7BQ6GQQ9 843 aa18.94■□□□□ 0.62
CSMD1-207ENST00000520451 FBXO46Q6PJ61 603 aaPredicted RBP18.94■□□□□ 0.62
CSMD1-207ENST00000520451 ATG9AQ7Z3C6 839 aa18.94■□□□□ 0.62
CSMD1-207ENST00000520451 TNRC18O15417 2968 aaPredicted RBP18.94■□□□□ 0.62
CSMD1-207ENST00000520451 MAP3K9P80192 1104 aa18.93■□□□□ 0.62
CSMD1-207ENST00000520451 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.93■□□□□ 0.62
CSMD1-207ENST00000520451 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
CSMD1-207ENST00000520451 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
CSMD1-207ENST00000520451 LAMB1P07942 1786 aa18.93■□□□□ 0.62
CSMD1-207ENST00000520451 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 CRHR2Q13324 411 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 VGLL4Q14135 290 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 ATP2B3Q16720 1220 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
CSMD1-207ENST00000520451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.62
CSMD1-207ENST00000520451 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 CEP126Q9P2H0 1117 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 CSADQ9Y600 493 aa18.92■□□□□ 0.62
CSMD1-207ENST00000520451 CIAO1O76071 339 aa18.91■□□□□ 0.62
CSMD1-207ENST00000520451 HHIPL2Q6UWX4 724 aa18.91■□□□□ 0.62
CSMD1-207ENST00000520451 PTPN18Q99952 460 aa18.91■□□□□ 0.62
CSMD1-207ENST00000520451 HDAC5Q9UQL6 1122 aa18.91■□□□□ 0.62
CSMD1-207ENST00000520451 TESPA1A2RU30 521 aaPredicted RBP18.9■□□□□ 0.62
CSMD1-207ENST00000520451 RARSP54136 660 aaKnown RBP18.9■□□□□ 0.62
CSMD1-207ENST00000520451 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
CSMD1-207ENST00000520451 FAM83AQ86UY5 434 aa18.9■□□□□ 0.62
CSMD1-207ENST00000520451 MS4A4AQ96JQ5 239 aa18.9■□□□□ 0.62
CSMD1-207ENST00000520451 MEIS3Q99687 375 aa18.9■□□□□ 0.62
CSMD1-207ENST00000520451 PA2G4Q9UQ80 394 aaKnown RBP18.9■□□□□ 0.62
CSMD1-207ENST00000520451 TRIM17Q9Y577 477 aa18.9■□□□□ 0.62
CSMD1-207ENST00000520451 HOOK2Q96ED9 719 aa18.89■□□□□ 0.61
CSMD1-207ENST00000520451 OTUD5Q96G74 571 aa18.89■□□□□ 0.61
CSMD1-207ENST00000520451 GNL3LQ9NVN8 582 aaKnown RBP18.89■□□□□ 0.61
CSMD1-207ENST00000520451 HTTP42858 3142 aa18.89■□□□□ 0.61
CSMD1-207ENST00000520451 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
CSMD1-207ENST00000520451 GTF2A2P52657 109 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 CCL15Q16663 113 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 OTOP1Q7RTM1 612 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 CD99L2Q8TCZ2 262 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 BRI3BPQ8WY22 251 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 ERO1AQ96HE7 468 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 WRNIP1Q96S55 665 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 MYH13Q9UKX3 1938 aa18.88■□□□□ 0.61
CSMD1-207ENST00000520451 PRDX5P30044 214 aa18.87■□□□□ 0.61
CSMD1-207ENST00000520451 DIXDC1Q155Q3 683 aa18.87■□□□□ 0.61
CSMD1-207ENST00000520451 DCAF15Q66K64 600 aa18.87■□□□□ 0.61
CSMD1-207ENST00000520451 RPAP1Q9BWH6 1393 aaPredicted RBP18.87■□□□□ 0.61
CSMD1-207ENST00000520451 DAGLAQ9Y4D2 1042 aa18.87■□□□□ 0.61
CSMD1-207ENST00000520451 SNCAIPQ9Y6H5 919 aa18.87■□□□□ 0.61
CSMD1-207ENST00000520451 SPDYE5A6NIY4 337 aa18.86■□□□□ 0.61
CSMD1-207ENST00000520451 LDHBP07195 334 aaKnown RBP18.86■□□□□ 0.61
CSMD1-207ENST00000520451 PHKA1P46020 1223 aa18.86■□□□□ 0.61
CSMD1-207ENST00000520451 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
CSMD1-207ENST00000520451 DENND2AQ9ULE3 1009 aa18.86■□□□□ 0.61
CSMD1-207ENST00000520451 PDE4DIPQ5VU43 2346 aa18.85■□□□□ 0.61
CSMD1-207ENST00000520451 SEMA3EO15041 775 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms