RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 ZNF70Q9UC06 446 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-219ENST00000518824 SERPINA10Q9UK55 444 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
VEGFA-219ENST00000518824 CACNB3P54284 484 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-219ENST00000518824 PRKG1Q13976 671 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 DIXDC1Q155Q3 683 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 APOBEC3FQ8IUX4 373 aaKnown RBP16.45■□□□□ 0.22
VEGFA-219ENST00000518824 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 WDR66Q8TBY9 1149 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 DEFB129Q9H1M3 183 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
VEGFA-219ENST00000518824 PAPPA2Q9BXP8 1791 aa16.44■□□□□ 0.22
VEGFA-219ENST00000518824 UBE2Q2LH0YL09 131 aa16.44■□□□□ 0.22
VEGFA-219ENST00000518824 PDE3AQ14432 1141 aa16.44■□□□□ 0.22
VEGFA-219ENST00000518824 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
VEGFA-219ENST00000518824 TLR7Q9NYK1 1049 aaKnown RBP16.44■□□□□ 0.22
VEGFA-219ENST00000518824 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
VEGFA-219ENST00000518824 FAM155AB1AL88 458 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-219ENST00000518824 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-219ENST00000518824 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-219ENST00000518824 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
VEGFA-219ENST00000518824 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
VEGFA-219ENST00000518824 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 FOXN1O15353 648 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 MCAMP43121 646 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 HDLBPQ00341 1268 aaKnown RBP16.42■□□□□ 0.22
VEGFA-219ENST00000518824 RASA3Q14644 834 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
VEGFA-219ENST00000518824 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
VEGFA-219ENST00000518824 MYH2Q9UKX2 1941 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 SEMA3EO15041 775 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 MYO1BO43795 1136 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-219ENST00000518824 ECE1P42892 770 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 GPR108Q9NPR9 543 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 WBP1LQ9NX94 342 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 DBNLQ9UJU6 430 aaKnown RBP16.41■□□□□ 0.22
VEGFA-219ENST00000518824 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
VEGFA-219ENST00000518824 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
VEGFA-219ENST00000518824 APBB1O00213 710 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 ZBTB22O15209 634 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 LDHBP07195 334 aaKnown RBP16.4■□□□□ 0.22
VEGFA-219ENST00000518824 TTLL12Q14166 644 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-219ENST00000518824 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-219ENST00000518824 TEPSINQ96N21 525 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 MRIQ9BWK5 157 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 IL1RAPL2Q9NP60 686 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 SNRKQ9NRH2 765 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
VEGFA-219ENST00000518824 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-219ENST00000518824 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
VEGFA-219ENST00000518824 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
VEGFA-219ENST00000518824 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
VEGFA-219ENST00000518824 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-219ENST00000518824 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
VEGFA-219ENST00000518824 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-219ENST00000518824 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
VEGFA-219ENST00000518824 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 MAST3O60307 1309 aa16.38■□□□□ 0.21
VEGFA-219ENST00000518824 PDS5AQ29RF7 1337 aaKnown RBP16.38■□□□□ 0.21
VEGFA-219ENST00000518824 SLC10A3P09131 477 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 FKBP1BP68106 108 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 NFIAQ12857 509 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-219ENST00000518824 CLMNQ96JQ2 1002 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 OTOFQ9HC10 1997 aa16.37■□□□□ 0.21
VEGFA-219ENST00000518824 USP2O75604 605 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-219ENST00000518824 NF2P35240 595 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 MAP2K2P36507 400 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
VEGFA-219ENST00000518824 MECOMQ03112 1051 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
VEGFA-219ENST00000518824 LDLRAD1Q5T700 205 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 AACSQ86V21 672 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 ZFPM1Q8IX07 1006 aa16.36■□□□□ 0.21
VEGFA-219ENST00000518824 GAKO14976 1311 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms