RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 TRIM47Q96LD4 638 aa12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
SH2D4A-202ENST00000518040 MYH3P11055 1940 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 GRK4P32298 578 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 TNNI2P48788 182 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 MTFR1Q15390 333 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 COL6A3P12111 3177 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
SH2D4A-202ENST00000518040 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 VGLL4Q14135 290 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 ZNF804AQ7Z570 1209 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
SH2D4A-202ENST00000518040 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 F8W031 263 aaPredicted RBP12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 EVI5O60447 810 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 FARP2O94887 1054 aaPredicted RBP12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 CCL5P13501 91 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 IL1R1P14778 569 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 KLRK1P26718 216 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 ERO1BQ86YB8 467 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 STXBP5LQ9Y2K9 1186 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
SH2D4A-202ENST00000518040 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 ITGA6P23229 1130 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 PSMC4P43686 418 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 CHRNDQ07001 517 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 C17orf99Q6UX52 265 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 U2AF1L4Q8WU68 220 aaKnown RBP12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 PLA2G12BQ9BX93 195 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
SH2D4A-202ENST00000518040 BTBD19C9JJ37 291 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 BMP8BP34820 402 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 KSR2Q6VAB6 950 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 LRCH3Q96II8 777 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
SH2D4A-202ENST00000518040 SGPL1O95470 568 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 OSBPP22059 807 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 PPIL2Q13356 520 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 H7C1W4 665 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 CALD1Q05682 793 aaKnown RBP12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 DEFB123Q8N688 67 aa12.61□□□□□ -0.39
SH2D4A-202ENST00000518040 IRF6O14896 467 aa12.6□□□□□ -0.39
SH2D4A-202ENST00000518040 UBE3BQ7Z3V4 1068 aa12.6□□□□□ -0.39
SH2D4A-202ENST00000518040 ANKRD23Q86SG2 305 aa12.6□□□□□ -0.39
SH2D4A-202ENST00000518040 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
SH2D4A-202ENST00000518040 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
SH2D4A-202ENST00000518040 ZSWIM8A7E2V4 1837 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 AOX1Q06278 1338 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 FAM205AQ6ZU69 1335 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 NEURL1BA8MQ27 555 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 CSF1RP07333 972 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 FCGRTP55899 365 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 GNAI1P63096 354 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 PPATQ06203 517 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 CPA4Q9UI42 421 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 TTF2Q9UNY4 1162 aaKnown RBP12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 LAMA3Q16787 3333 aa12.59□□□□□ -0.39
SH2D4A-202ENST00000518040 TCP10L2B9ZVM9 353 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 LRIT3Q3SXY7 679 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 MFSD14BQ5SR56 506 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 WRNIP1Q96S55 665 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 GDF15Q99988 308 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 ARAP2Q8WZ64 1704 aa12.58□□□□□ -0.4
SH2D4A-202ENST00000518040 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
SH2D4A-202ENST00000518040 CTGFP29279 349 aa12.57□□□□□ -0.4
SH2D4A-202ENST00000518040 RALBP1Q15311 655 aa12.57□□□□□ -0.4
SH2D4A-202ENST00000518040 DCAF15Q66K64 600 aa12.57□□□□□ -0.4
SH2D4A-202ENST00000518040 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms