RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 EN2P19622 333 aaPredicted RBP9.34□□□□□ -0.91
PVT1-206ENST00000517838 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 NF2P35240 595 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 E2F4Q16254 413 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 WDR70Q9NW82 654 aa9.34□□□□□ -0.91
PVT1-206ENST00000517838 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
PVT1-206ENST00000517838 LAS1LQ9Y4W2 734 aaKnown RBP9.34□□□□□ -0.91
PVT1-206ENST00000517838 CENPFP49454 3210 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
PVT1-206ENST00000517838 SASH1O94885 1247 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 PCCAP05165 728 aaPredicted RBP9.33□□□□□ -0.92
PVT1-206ENST00000517838 HOXB7P09629 217 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 INHBEP58166 350 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 CAP1Q01518 475 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 LMOD3Q0VAK6 560 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 CCDC27Q2M243 656 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 RIC3Q7Z5B4 369 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 ANKRD18AQ8IVF6 992 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 FRAT1Q92837 279 aaPredicted RBP9.33□□□□□ -0.92
PVT1-206ENST00000517838 SLC10A4Q96EP9 437 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
PVT1-206ENST00000517838 MINPP1Q9UNW1 487 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
PVT1-206ENST00000517838 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
PVT1-206ENST00000517838 SCN9AQ15858 1988 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 SZT2Q5T011 3432 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 MANSC4A6NHS7 340 aaPredicted RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 EVI5O60447 810 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 PDE8AO60658 829 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 HSP90B1P14625 803 aaKnown RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 C20orf194Q5TEA3 1177 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 STRIP1Q5VSL9 837 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 TRMT2AQ8IZ69 625 aaKnown RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 CCDC191Q8NCU4 936 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 ARMC5Q96C12 935 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 ZBED3Q96IU2 234 aaPredicted RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 CLMNQ96JQ2 1002 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 MYD88Q99836 296 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
PVT1-206ENST00000517838 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
PVT1-206ENST00000517838 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
PVT1-206ENST00000517838 DPYSL4O14531 572 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 BCAR3O75815 825 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 ZBTB48P10074 688 aaPredicted RBP9.31□□□□□ -0.92
PVT1-206ENST00000517838 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
PVT1-206ENST00000517838 MAP3K11Q16584 847 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 CD99L2Q8TCZ2 262 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 FBXW7Q969H0 707 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 COA1Q9GZY4 146 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 BSDC1Q9NW68 430 aaPredicted RBP9.31□□□□□ -0.92
PVT1-206ENST00000517838 MED23Q9ULK4 1368 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 AKAP11Q9UKA4 1901 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 MYO3BQ8WXR4 1341 aa9.31□□□□□ -0.92
PVT1-206ENST00000517838 KLRK1P26718 216 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 GJA5P36382 358 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 MMP14P50281 582 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 CCT4P50991 539 aaKnown RBP9.3□□□□□ -0.92
PVT1-206ENST00000517838 CRHR2Q13324 411 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 TTLL5Q6EMB2 1281 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
PVT1-206ENST00000517838 KIAA0825Q8IV33 1275 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 TTLL11Q8NHH1 800 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 WNK4Q96J92 1243 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 PTPN18Q99952 460 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 GREM2Q9H772 168 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 EFCC1Q9HA90 598 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 CWC25Q9NXE8 425 aaPredicted RBP9.3□□□□□ -0.92
PVT1-206ENST00000517838 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
PVT1-206ENST00000517838 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
PVT1-206ENST00000517838 CTSWP56202 376 aa9.29□□□□□ -0.92
PVT1-206ENST00000517838 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
PVT1-206ENST00000517838 ZNF333Q96JL9 665 aa9.29□□□□□ -0.92
PVT1-206ENST00000517838 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
PVT1-206ENST00000517838 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
PVT1-206ENST00000517838 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
PVT1-206ENST00000517838 IL16Q14005 1332 aa9.29□□□□□ -0.92
PVT1-206ENST00000517838 TESPA1A2RU30 521 aaPredicted RBP9.28□□□□□ -0.92
PVT1-206ENST00000517838 UNCXA6NJT0 531 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 H0YGN5 161 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 ELL2O00472 640 aaPredicted RBP9.28□□□□□ -0.92
PVT1-206ENST00000517838 ZNF853P0CG23 659 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 GTF2IP78347 998 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 SP3Q02447 781 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 NBPF12Q5TAG4 269 aaPredicted RBP9.28□□□□□ -0.92
PVT1-206ENST00000517838 CENPQQ7L2Z9 268 aaPredicted RBP9.28□□□□□ -0.92
PVT1-206ENST00000517838 FTSJ3Q8IY81 847 aaKnown RBP9.28□□□□□ -0.92
PVT1-206ENST00000517838 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
PVT1-206ENST00000517838 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms