RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TMEM238LA0A1B0GVL6 79 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 FSTP19883 344 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 ATP2B2Q01814 1243 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 AP3B2Q13367 1082 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 DSC3Q14574 896 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 ENOX2Q16206 610 aaKnown RBP6.17□□□□□ -1.42
CAST-242ENST00000515063 HGSNATQ68CP4 663 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 C12orf50Q8NA57 414 aaPredicted RBP6.17□□□□□ -1.42
CAST-242ENST00000515063 SMG8Q8ND04 991 aaKnown RBP6.17□□□□□ -1.42
CAST-242ENST00000515063 ASB16Q96NS5 453 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 CORO1BQ9BR76 489 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 YIPF2Q9BWQ6 316 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 ABCB6Q9NP58 842 aa6.17□□□□□ -1.42
CAST-242ENST00000515063 PREPP48147 710 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 FGD1P98174 961 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 PPP2R3AQ06190 1150 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 GRM2Q14416 872 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 POU4F3Q15319 338 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 ZNF423Q2M1K9 1284 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 CLEC10AQ8IUN9 316 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 FAM20CQ8IXL6 584 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 ARMC10Q8N2F6 343 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 EPS8L3Q8TE67 593 aaKnown RBP6.16□□□□□ -1.42
CAST-242ENST00000515063 SRCIN1Q9C0H9 1055 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 KCNF1Q9H3M0 494 aa6.16□□□□□ -1.42
CAST-242ENST00000515063 IGLV1-40P01703 118 aa6.15□□□□□ -1.42
CAST-242ENST00000515063 BMP3P12645 472 aa6.15□□□□□ -1.42
CAST-242ENST00000515063 RNF112Q9ULX5 631 aa6.15□□□□□ -1.42
CAST-242ENST00000515063 GIPC1O14908 333 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 MAOBP27338 520 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 MAPK8P45983 427 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 USP11P51784 963 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 FCGRTP55899 365 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 FMR1Q06787 632 aaKnown RBP eCLIP6.14□□□□□ -1.43
CAST-242ENST00000515063 BEND4Q6ZU67 534 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 Q8N3U1 123 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 GIMAP7Q8NHV1 300 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 DBNDD2Q9BQY9 259 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 BCO2Q9BYV7 579 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 NRSN2Q9GZP1 204 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 C7orf69Q9H7B7 122 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 RAD18Q9NS91 495 aa6.14□□□□□ -1.43
CAST-242ENST00000515063 TIAF1O95411 115 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 RXRBP28702 533 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 NFIAQ12857 509 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 LRP8Q14114 963 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.13□□□□□ -1.43
CAST-242ENST00000515063 RNF43Q68DV7 783 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 AEBP1Q8IUX7 1158 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 FAM83CQ9BQN1 747 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 SPG7Q9UQ90 795 aa6.13□□□□□ -1.43
CAST-242ENST00000515063 MAP4P27816 1152 aaKnown RBP6.12□□□□□ -1.43
CAST-242ENST00000515063 GSTT1P30711 240 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 SOX4Q06945 474 aaPredicted RBP6.12□□□□□ -1.43
CAST-242ENST00000515063 PDE3AQ14432 1141 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 ARTNQ5T4W7 220 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 GLIS3Q8NEA6 775 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 FRMD6Q96NE9 622 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 TRIM56Q9BRZ2 755 aaKnown RBP6.12□□□□□ -1.43
CAST-242ENST00000515063 ZFP64Q9NPA5 681 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 TMEM39AQ9NV64 488 aa6.12□□□□□ -1.43
CAST-242ENST00000515063 GPN3Q9UHW5 284 aaPredicted RBP6.12□□□□□ -1.43
CAST-242ENST00000515063 HMX2A2RU54 273 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 ADH5P11766 374 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 GRIK1P39086 918 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 PAOXQ6QHF9 649 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 SND1Q7KZF4 910 aaKnown RBP eCLIP6.11□□□□□ -1.43
CAST-242ENST00000515063 PPM1HQ9ULR3 514 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 SAMM50Q9Y512 469 aa6.11□□□□□ -1.43
CAST-242ENST00000515063 NACADO15069 1562 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 FAM95CA0A1B0GW59 222 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 DLGAP3O95886 979 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 COL19A1Q14993 1142 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 CPSF6Q16630 551 aaKnown RBP eCLIP6.1□□□□□ -1.43
CAST-242ENST00000515063 AKAP4Q5JQC9 854 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 NXPE4Q6UWF7 544 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 PI16Q6UXB8 463 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 NBPF11Q86T75 865 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 EMILIN2Q9BXX0 1053 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 CEP44Q9C0F1 390 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 AP4E1Q9UPM8 1137 aa6.1□□□□□ -1.43
CAST-242ENST00000515063 ABCC9O60706 1549 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 SLFN14P0C7P3 912 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 DRD2P14416 443 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 FAAP100Q0VG06 881 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 MAP7Q14244 749 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 INTS5Q6P9B9 1019 aaKnown RBP6.09□□□□□ -1.43
CAST-242ENST00000515063 C2CD4AQ8NCU7 369 aaPredicted RBP6.09□□□□□ -1.43
CAST-242ENST00000515063 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
CAST-242ENST00000515063 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.08□□□□□ -1.44
CAST-242ENST00000515063 AOC2O75106 756 aa6.08□□□□□ -1.44
CAST-242ENST00000515063 COBLO75128 1261 aa6.08□□□□□ -1.44
CAST-242ENST00000515063 LDHBP07195 334 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms