RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 SPOCK3Q9BQ16 436 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 RSRP1Q9BUV0 290 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 NOP53Q9NZM5 478 aaKnown RBP3.83□□□□□ -1.8
RNF4-219ENST00000513450 SAMM50Q9Y512 469 aa3.83□□□□□ -1.8
RNF4-219ENST00000513450 A0A0A0MRY4 1105 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 FBXO24O75426 580 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 CYP11A1P05108 521 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 NME2P22392 152 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 CDC25BP30305 580 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 RPS26P62854 115 aaKnown RBP3.82□□□□□ -1.8
RNF4-219ENST00000513450 HDLBPQ00341 1268 aaKnown RBP3.82□□□□□ -1.8
RNF4-219ENST00000513450 AP3B2Q13367 1082 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 SETDB1Q15047 1291 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 PLA2G4EQ3MJ16 856 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 SCARA3Q6AZY7 606 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 METTL16Q86W50 562 aaKnown RBP3.82□□□□□ -1.8
RNF4-219ENST00000513450 FBXO11Q86XK2 927 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 FMR1NBQ8N0W7 255 aaPredicted RBP3.82□□□□□ -1.8
RNF4-219ENST00000513450 Q8N3U1 123 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 SLC7A3Q8WY07 619 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 TRIM11Q96F44 468 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 PLVAPQ9BX97 442 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 EMILIN2Q9BXX0 1053 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 GGT7Q9UJ14 662 aa3.82□□□□□ -1.8
RNF4-219ENST00000513450 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 K7ELQ4 463 aaPredicted RBP3.81□□□□□ -1.8
RNF4-219ENST00000513450 TM4SF5O14894 197 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 DEAF1O75398 565 aaPredicted RBP3.81□□□□□ -1.8
RNF4-219ENST00000513450 CELA3AP09093 270 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 ARNTP27540 789 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 CD68P34810 354 aaPredicted RBP3.81□□□□□ -1.8
RNF4-219ENST00000513450 ZNF157P51786 506 aaPredicted RBP3.81□□□□□ -1.8
RNF4-219ENST00000513450 HNRNPUQ00839 825 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNF4-219ENST00000513450 GSTM4Q03013 218 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 TRIM28Q13263 835 aaKnown RBP3.81□□□□□ -1.8
RNF4-219ENST00000513450 LRRC14Q15048 493 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 PRRT3Q5FWE3 981 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 TTBK2Q6IQ55 1244 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 TXNDC11Q6PKC3 985 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 NT5DC4Q86YG4 428 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 KRTAP1-3Q8IUG1 177 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 RELL1Q8IUW5 271 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 SULF2Q8IWU5 870 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 KLHDC7BQ96G42 594 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 CYP8B1Q9UNU6 501 aa3.81□□□□□ -1.8
RNF4-219ENST00000513450 CNTNAP5Q8WYK1 1306 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 DLL1O00548 723 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 PAGE1O75459 146 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 GSTP1P09211 210 aaKnown RBP3.8□□□□□ -1.8
RNF4-219ENST00000513450 ELNP15502 786 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 BMP6P22004 513 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 ERCC5P28715 1186 aaPredicted RBP3.8□□□□□ -1.8
RNF4-219ENST00000513450 LIG3P49916 1009 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 POU4F3Q15319 338 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 HP1BP3Q5SSJ5 553 aaPredicted RBP3.8□□□□□ -1.8
RNF4-219ENST00000513450 PCNX4Q63HM2 1172 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 AGMOQ6ZNB7 445 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 USP48Q86UV5 1035 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 ALYREFQ86V81 257 aaKnown RBP3.8□□□□□ -1.8
RNF4-219ENST00000513450 ZNF654Q8IZM8 581 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 GALNT11Q8NCW6 608 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 TMEM74Q96NL1 305 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 CORO1BQ9BR76 489 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 TRIM56Q9BRZ2 755 aaKnown RBP3.8□□□□□ -1.8
RNF4-219ENST00000513450 CARD10Q9BWT7 1032 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 TGIF2Q9GZN2 237 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 NRSN2Q9GZP1 204 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 KBTBD4Q9NVX7 518 aa3.8□□□□□ -1.8
RNF4-219ENST00000513450 SPATA31C1P0DKV0 1188 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 LMNB1P20700 586 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 GBP2P32456 591 aaPredicted RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 RAD51AP2Q09MP3 1159 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 ZNF252P-AS1Q0IIN9 211 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 FOXD4L6Q3SYB3 417 aaPredicted RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 C9orf131Q5VYM1 1079 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 HGSNATQ68CP4 663 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 DIEXFQ68CQ4 756 aaKnown RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 LLGL2Q6P1M3 1020 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 IGF2-ASQ6U949 168 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 FOXD4L3Q6VB84 417 aaPredicted RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 PDZD3Q86UT5 571 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 CCDC84Q86UT8 332 aaPredicted RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 PHC3Q8NDX5 983 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 RHOVQ96L33 236 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 KRT82Q9NSB4 513 aa3.79□□□□□ -1.8
RNF4-219ENST00000513450 DDX41Q9UJV9 622 aaKnown RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.79□□□□□ -1.8
RNF4-219ENST00000513450 SYNGAP1Q96PV0 1343 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 LOC100289279A0A1B0GTE1 492 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 MEGF11A6BM72 1044 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 ADAM11O75078 769 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 TRIM37O94972 964 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 MAOBP27338 520 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 EIF4A3P38919 411 aaKnown RBP3.78□□□□□ -1.8
RNF4-219ENST00000513450 NLRP12P59046 1061 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 ZC3H6P61129 1189 aaKnown RBP3.78□□□□□ -1.8
RNF4-219ENST00000513450 RACK1P63244 317 aaKnown RBP3.78□□□□□ -1.8
RNF4-219ENST00000513450 LMNB2Q03252 620 aa3.78□□□□□ -1.8
RNF4-219ENST00000513450 MAP3K11Q16584 847 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms