RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 FAM155AB1AL88 458 aaPredicted RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 SEMA3EO15041 775 aa14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 FOXN1O15353 648 aa14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 CEP85Q6P2H3 762 aa14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 ZIC5Q96T25 663 aa14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 TDRD3Q9H7E2 651 aaKnown RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 ZNF70Q9UC06 446 aaPredicted RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 DENND2AQ9ULE3 1009 aa14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 NOP58Q9Y2X3 529 aaKnown RBP14.37□□□□□ -0.11
SH3RF1-205ENST00000511421 VEZTQ9HBM0 779 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 COG6Q9Y2V7 657 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 PPP2R3BQ9Y5P8 575 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 SALL1Q9NSC2 1324 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 UBE2Q2LH0YL09 131 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 NF2P35240 595 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 ZNF157P51786 506 aaPredicted RBP14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 NOGQ13253 232 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 RASGRF1Q13972 1273 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 TEKT1Q969V4 418 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 ZDHHC15Q96MV8 337 aa14.36□□□□□ -0.11
SH3RF1-205ENST00000511421 MAST3O60307 1309 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 SLC10A3P09131 477 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 PRDX5P30044 214 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 RASA3Q14644 834 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 HHIPL2Q6UWX4 724 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 NEUROD6Q96NK8 337 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 GPR108Q9NPR9 543 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
SH3RF1-205ENST00000511421 ECM29Q5VYK3 1845 aa14.34□□□□□ -0.11
SH3RF1-205ENST00000511421 PDS5AQ29RF7 1337 aaKnown RBP14.34□□□□□ -0.11
SH3RF1-205ENST00000511421 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
SH3RF1-205ENST00000511421 AIDAQ96BJ3 306 aa14.34□□□□□ -0.11
SH3RF1-205ENST00000511421 TTLL12Q14166 644 aaPredicted RBP14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 PDE3AQ14432 1141 aa14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 C20orf194Q5TEA3 1177 aa14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 RASAL3Q86YV0 1011 aa14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 SSC5DA1L4H1 1573 aa14.33□□□□□ -0.11
SH3RF1-205ENST00000511421 TCP10L2B9ZVM9 353 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 LDHBP07195 334 aaKnown RBP14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 OS9Q13438 667 aaPredicted RBP14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 TNFAIP1Q13829 316 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 PRKG1Q13976 671 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 TNNI3KQ59H18 835 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 LDLRAD1Q5T700 205 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 TEPSINQ96N21 525 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 FZD1Q9UP38 647 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 FPGT-TNNI3KV9GXZ4 949 aa14.33□□□□□ -0.12
SH3RF1-205ENST00000511421 MYH13Q9UKX3 1938 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 HSPA8P11142 646 aaKnown RBP14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 ARID4AP29374 1257 aaPredicted RBP14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 MAP3K11Q16584 847 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 SUPT20HL1Q3ZLR7 823 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 HMG20BQ9P0W2 317 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 ANGEL1Q9UNK9 670 aaKnown RBP14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
SH3RF1-205ENST00000511421 CACNB3P54284 484 aa14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 GORABQ5T7V8 394 aa14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 SIRT2Q8IXJ6 389 aa14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
SH3RF1-205ENST00000511421 LBX1P52954 281 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 FKBP1CQ5VVH2 108 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 PI16Q6UXB8 463 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 SPATA5Q8NB90 893 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 PRDM10Q9NQV6 1147 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 USP2O75604 605 aaPredicted RBP14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 MCAMP43121 646 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 TNNI2P48788 182 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 CSRNP1Q96S65 589 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 ABCF2Q9UG63 623 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 EXOC6BQ9Y2D4 811 aa14.3□□□□□ -0.12
SH3RF1-205ENST00000511421 GAKO14976 1311 aa14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 ZNF384Q8TF68 577 aa14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
SH3RF1-205ENST00000511421 CA12O43570 354 aa14.28□□□□□ -0.12
SH3RF1-205ENST00000511421 SPTY2D1Q68D10 685 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms