RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 PTPN18Q99952 460 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 VEZTQ9HBM0 779 aa7.44□□□□□ -1.22
GYPB-205ENST00000505583 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
GYPB-205ENST00000505583 FKBP1AP62942 108 aaKnown RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 SLC4A10Q6U841 1118 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 ZNF804AQ7Z570 1209 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 TDRD7Q8NHU6 1098 aaKnown RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 SUCLG2Q96I99 432 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 FAM84BQ96KN1 310 aaPredicted RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 TEPSINQ96N21 525 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 TDRD3Q9H7E2 651 aaKnown RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 TSHZ2Q9NRE2 1034 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 CNNM1Q9NRU3 951 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 FAM205AQ6ZU69 1335 aa7.43□□□□□ -1.22
GYPB-205ENST00000505583 RBBP6Q7Z6E9 1792 aaKnown RBP7.43□□□□□ -1.22
GYPB-205ENST00000505583 POTEFA5A3E0 1075 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 MANSC4A6NHS7 340 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 PPP1R12BO60237 982 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 ZBTB48P10074 688 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 CRHR2Q13324 411 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 MFSD14BQ5SR56 506 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 OTOP1Q7RTM1 612 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 ZNF70Q9UC06 446 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 TTF2Q9UNY4 1162 aaKnown RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 IQSEC3Q9UPP2 1182 aaPredicted RBP7.42□□□□□ -1.22
GYPB-205ENST00000505583 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 TRIM17Q9Y577 477 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 PPP2R3BQ9Y5P8 575 aa7.42□□□□□ -1.22
GYPB-205ENST00000505583 HTTP42858 3142 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 TCP10L2B9ZVM9 353 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 MYO1BO43795 1136 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 HIBADHP31937 336 aaKnown RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 CACNB3P54284 484 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 INHBEP58166 350 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 NBR1Q14596 966 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 SUPT20HL1Q3ZLR7 823 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 LRRC24Q50LG9 513 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 TAF7LQ5H9L4 462 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 PRPF38BQ5VTL8 546 aaKnown RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 ANKRD44Q8N8A2 993 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 KLHDC4Q8TBB5 520 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 RNF25Q96BH1 459 aaPredicted RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 OPTNQ96CV9 577 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 FAM212AQ96EL1 285 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 MS4A4AQ96JQ5 239 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 SRCIN1Q9C0H9 1055 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 TMEM39BQ9GZU3 492 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 BICC1Q9H694 974 aaKnown RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
GYPB-205ENST00000505583 C9orf78Q9NZ63 289 aaPredicted RBP7.41□□□□□ -1.22
GYPB-205ENST00000505583 MYH13Q9UKX3 1938 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 TESPA1A2RU30 521 aaPredicted RBP7.4□□□□□ -1.22
GYPB-205ENST00000505583 ALDH1L1O75891 902 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 ALDH1A1P00352 501 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 CRKP46108 304 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 IREB2P48200 963 aaKnown RBP7.4□□□□□ -1.22
GYPB-205ENST00000505583 VGLL4Q14135 290 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 UBE4AQ14139 1066 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 RABL6Q3YEC7 729 aaPredicted RBP7.4□□□□□ -1.22
GYPB-205ENST00000505583 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 FAM9BQ8IZU0 186 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 VGLL2Q8N8G2 317 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 SP7Q8TDD2 431 aaPredicted RBP7.4□□□□□ -1.22
GYPB-205ENST00000505583 BRI3BPQ8WY22 251 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 UTYO14607 1347 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
GYPB-205ENST00000505583 CENPFP49454 3210 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 BCAMP50895 628 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
GYPB-205ENST00000505583 FAM43AQ8N2R8 423 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
GYPB-205ENST00000505583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.39□□□□□ -1.235e-10■□□□□ 9.2
GYPB-205ENST00000505583 PTPN22Q9Y2R2 807 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 BRCA2P51587 3418 aa7.39□□□□□ -1.23
GYPB-205ENST00000505583 MROH5Q6ZUA9 1318 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 ANP32CO43423 234 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 PDE8BO95263 885 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 PRKAR2AP13861 404 aaKnown RBP7.38□□□□□ -1.23
GYPB-205ENST00000505583 EN2P19622 333 aaPredicted RBP7.38□□□□□ -1.23
GYPB-205ENST00000505583 SP3Q02447 781 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 APOBEC3HQ6NTF7 200 aaKnown RBP7.38□□□□□ -1.23
GYPB-205ENST00000505583 ARMC5Q96C12 935 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 ERO1AQ96HE7 468 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 ARHGAP39Q9C0H5 1083 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 USP44Q9H0E7 712 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 SNCAIPQ9Y6H5 919 aa7.38□□□□□ -1.23
GYPB-205ENST00000505583 CCL15-CCL14A0A0B4J2E2 113 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 FGFR2P21802 821 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 RFX5P48382 616 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms