RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ZFYVE28Q9HCC9 887 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 PPP2R3BQ9Y5P8 575 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-205ENST00000497015 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
SRSF4-205ENST00000497015 IGKV5-2P06315 115 aa12.57□□□□□ -0.4
SRSF4-205ENST00000497015 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
SRSF4-205ENST00000497015 GNAI1P63096 354 aa12.57□□□□□ -0.4
SRSF4-205ENST00000497015 DIEXFQ68CQ4 756 aaKnown RBP12.57□□□□□ -0.4
SRSF4-205ENST00000497015 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
SRSF4-205ENST00000497015 CWC25Q9NXE8 425 aaPredicted RBP12.57□□□□□ -0.4
SRSF4-205ENST00000497015 IL16Q14005 1332 aa12.57□□□□□ -0.4
SRSF4-205ENST00000497015 CCL15-CCL14A0A0B4J2E2 113 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 TLR2O60603 784 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 GJA8P48165 433 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 CCL15Q16663 113 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
SRSF4-205ENST00000497015 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
SRSF4-205ENST00000497015 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 STAP2Q9UGK3 403 aa12.56□□□□□ -0.4
SRSF4-205ENST00000497015 STK25O00506 426 aa12.55□□□□□ -0.4
SRSF4-205ENST00000497015 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
SRSF4-205ENST00000497015 VGLL4Q14135 290 aa12.55□□□□□ -0.4
SRSF4-205ENST00000497015 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
SRSF4-205ENST00000497015 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
SRSF4-205ENST00000497015 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
SRSF4-205ENST00000497015 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
SRSF4-205ENST00000497015 BTBD19C9JJ37 291 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 GJB1P08034 283 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 GTF2A2P52657 109 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
SRSF4-205ENST00000497015 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
SRSF4-205ENST00000497015 JAG2Q9Y219 1238 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
SRSF4-205ENST00000497015 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
SRSF4-205ENST00000497015 TAF5LO75529 589 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 CCL5P13501 91 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 Q7L0L9 218 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 TDRD3Q9H7E2 651 aaKnown RBP12.53□□□□□ -0.4
SRSF4-205ENST00000497015 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
SRSF4-205ENST00000497015 H7C1W4 665 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 IL1R1P14778 569 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 OSBPP22059 807 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 CHRNDQ07001 517 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
SRSF4-205ENST00000497015 TMEM39BQ9GZU3 492 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 SRRDQ9UH36 339 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
SRSF4-205ENST00000497015 A0A1W2PPC1 479 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 IRF6O14896 467 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 GNRH1P01148 92 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 GRK4P32298 578 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 PSMC4P43686 418 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
SRSF4-205ENST00000497015 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
SRSF4-205ENST00000497015 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 HTATIP2Q9BUP3 242 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
SRSF4-205ENST00000497015 CUL9Q8IWT3 2517 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 MYO1BO43795 1136 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 CSF1RP07333 972 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 ITGA6P23229 1130 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 CASP7P55210 303 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 PRMT2P55345 433 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 FKBP1AP62942 108 aaKnown RBP12.5□□□□□ -0.41
SRSF4-205ENST00000497015 KIF22Q14807 665 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 DEFB123Q8N688 67 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
SRSF4-205ENST00000497015 ZKSCAN4Q969J2 545 aaPredicted RBP12.5□□□□□ -0.41
SRSF4-205ENST00000497015 GDF15Q99988 308 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 UNC93B1Q9H1C4 597 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 MTMR10Q9NXD2 777 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 ADGRA2Q96PE1 1338 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 SPEF2Q9C093 1822 aa12.5□□□□□ -0.41
SRSF4-205ENST00000497015 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 TCP10L2B9ZVM9 353 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 SGPL1O95470 568 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
SRSF4-205ENST00000497015 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
SRSF4-205ENST00000497015 MOGSQ13724 837 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 GRIK5Q16478 980 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 GABRQQ9UN88 632 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 STXBP5LQ9Y2K9 1186 aa12.49□□□□□ -0.41
SRSF4-205ENST00000497015 ZNF521Q96K83 1311 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1190.4 ms