RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SUPT20HL1Q3ZLR7 823 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
GARNL3-219ENST00000495172 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
GARNL3-219ENST00000495172 ZNF804BA4D1E1 1349 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
GARNL3-219ENST00000495172 FLT3LGP49771 235 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 TRIM32Q13049 653 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 C9orf50Q5SZB4 431 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 CERS5Q8N5B7 392 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
GARNL3-219ENST00000495172 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 EPHX3Q9H6B9 360 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
GARNL3-219ENST00000495172 IRF6O14896 467 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 GTF2IP78347 998 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 POLA2Q14181 598 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 LRRC26Q2I0M4 334 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 STRIP1Q5VSL9 837 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.82□□□□□ -0.52
GARNL3-219ENST00000495172 HCN4Q9Y3Q4 1203 aa11.82□□□□□ -0.52
GARNL3-219ENST00000495172 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 CETPP11597 493 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 GRIN2CQ14957 1233 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 SHHQ15465 462 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-219ENST00000495172 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 ZKSCAN4Q969J2 545 aaPredicted RBP11.81□□□□□ -0.52
GARNL3-219ENST00000495172 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 SNCAIPQ9Y6H5 919 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 XDHP47989 1333 aa11.81□□□□□ -0.52
GARNL3-219ENST00000495172 FAM86C2PA6NEL3 165 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 PDHXO00330 501 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-219ENST00000495172 CYP2C8P10632 490 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 MRE11P49959 708 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 MAP3K9P80192 1104 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 CFAP100Q494V2 611 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
GARNL3-219ENST00000495172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
GARNL3-219ENST00000495172 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 FAM205AQ6ZU69 1335 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 CHD9Q3L8U1 2897 aa11.8□□□□□ -0.52
GARNL3-219ENST00000495172 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 WDHD1O75717 1129 aaPredicted RBP11.79□□□□□ -0.52
GARNL3-219ENST00000495172 FCGRTP55899 365 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 TEPSINQ96N21 525 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 KNSTRNQ9Y448 316 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 CFAP54Q96N23 3096 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
GARNL3-219ENST00000495172 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
GARNL3-219ENST00000495172 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
GARNL3-219ENST00000495172 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
GARNL3-219ENST00000495172 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
GARNL3-219ENST00000495172 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
GARNL3-219ENST00000495172 ZBTB38Q8NAP3 1195 aaPredicted RBP11.78□□□□□ -0.52
GARNL3-219ENST00000495172 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
GARNL3-219ENST00000495172 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 BCRP11274 1271 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 CCDC85BQ15834 202 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-219ENST00000495172 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 C1QTNF1Q9BXJ1 281 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 CSADQ9Y600 493 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 USP34Q70CQ2 3546 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 MYO9BQ13459 2157 aa11.77□□□□□ -0.53
GARNL3-219ENST00000495172 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
GARNL3-219ENST00000495172 MOGSQ13724 837 aa11.76□□□□□ -0.53
GARNL3-219ENST00000495172 HELBQ8NG08 1087 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-219ENST00000495172 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.53
GARNL3-219ENST00000495172 C11orf16Q9NQ32 467 aa11.76□□□□□ -0.53
GARNL3-219ENST00000495172 ARAP2Q8WZ64 1704 aa11.75□□□□□ -0.53
GARNL3-219ENST00000495172 SNAP23O00161 211 aa11.75□□□□□ -0.53
GARNL3-219ENST00000495172 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
GARNL3-219ENST00000495172 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
GARNL3-219ENST00000495172 ISCA1Q9BUE6 129 aa11.75□□□□□ -0.53
GARNL3-219ENST00000495172 TDRD3Q9H7E2 651 aaKnown RBP11.75□□□□□ -0.53
GARNL3-219ENST00000495172 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-219ENST00000495172 CHD7Q9P2D1 2997 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 CCT4P50991 539 aaKnown RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 ANKRD23Q86SG2 305 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 ATXN2LQ8WWM7 1075 aaKnown RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 ZCCHC17Q9NP64 241 aaKnown RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-219ENST00000495172 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
GARNL3-219ENST00000495172 TNPO2O14787 897 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms