RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.07
HMGN1-220ENST00000492280 KIAA2012Q0VF49 1180 aa14.58□□□□□ -0.07
HMGN1-220ENST00000492280 LLPHQ9BRT6 129 aaKnown RBP14.58□□□□□ -0.07
HMGN1-220ENST00000492280 EPB41L4AQ9HCS5 686 aaPredicted RBP14.58□□□□□ -0.07
HMGN1-220ENST00000492280 MBD4O95243 580 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
HMGN1-220ENST00000492280 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.08
HMGN1-220ENST00000492280 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-220ENST00000492280 PTF1AQ7RTS3 328 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 FSIP1Q8NA03 581 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 MPHOSPH8Q99549 860 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 ZSCAN16Q9H4T2 348 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-220ENST00000492280 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
HMGN1-220ENST00000492280 NIP7Q9Y221 180 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGN1-220ENST00000492280 PTGS1P23219 599 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 IL6STP40189 918 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 C3orf67Q6ZVT6 689 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 CCDC82Q8N4S0 544 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 AIDAQ96BJ3 306 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 ZNF274Q96GC6 653 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 CDC27P30260 824 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 SIK1P57059 783 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 LRMPQ12912 555 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 NAA16Q6N069 864 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 CFAP45Q9UL16 551 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 ZNF165P49910 485 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 SASS6Q6UVJ0 657 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 SLC51AQ86UW1 340 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 CMTR1Q8N1G2 835 aaKnown RBP14.57□□□□□ -0.08
HMGN1-220ENST00000492280 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
HMGN1-220ENST00000492280 FAM182BQ5T319 152 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 SPATA5Q8NB90 893 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 PCDHA7Q9UN72 937 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 COL14A1Q05707 1796 aaKnown RBP14.56□□□□□ -0.08
HMGN1-220ENST00000492280 UQCRHLA0A096LP55 91 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 UQCRHP07919 91 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 MARCKSP29966 332 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-220ENST00000492280 SNW1Q13573 536 aaKnown RBP14.56□□□□□ -0.08
HMGN1-220ENST00000492280 TRIM5Q9C035 493 aa14.56□□□□□ -0.08
HMGN1-220ENST00000492280 TCRBV5S4A2TA0A5A2 114 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 LRRFIP1Q32MZ4 808 aaKnown RBP14.55□□□□□ -0.08
HMGN1-220ENST00000492280 DRC7Q8IY82 874 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 LCORLQ8N3X6 602 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 BAZ2BQ9UIF8 2168 aaKnown RBP14.55□□□□□ -0.08
HMGN1-220ENST00000492280 CAMTA2O94983 1202 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 TRDNQ13061 729 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 LPIN2Q92539 896 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 RCOR1Q9UKL0 485 aa14.55□□□□□ -0.08
HMGN1-220ENST00000492280 BIN1O00499 593 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 FGFR2P21802 821 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 ARID4AP29374 1257 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-220ENST00000492280 NFXL1Q6ZNB6 911 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 CCDC73Q6ZRK6 1079 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 STRBPQ96SI9 672 aaKnown RBP14.54□□□□□ -0.08
HMGN1-220ENST00000492280 UTP14AQ9BVJ6 771 aaKnown RBP14.54□□□□□ -0.08
HMGN1-220ENST00000492280 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-220ENST00000492280 ABCF2Q9UG63 623 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGN1-220ENST00000492280 NDUFA8P51970 172 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 STK38Q15208 465 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 ADGRA1Q86SQ6 560 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 JAG2Q9Y219 1238 aa14.54□□□□□ -0.08
HMGN1-220ENST00000492280 GYG1P46976 350 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 NOLC1Q14978 699 aaKnown RBP eCLIP14.53□□□□□ -0.083e-16■□□□□ 10.2
HMGN1-220ENST00000492280 SF3A1Q15459 793 aaKnown RBP14.53□□□□□ -0.08
HMGN1-220ENST00000492280 RBM43Q6ZSC3 357 aaKnown RBP14.53□□□□□ -0.08
HMGN1-220ENST00000492280 CCDC186Q7Z3E2 898 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 SDR42E1Q8WUS8 393 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 ANGEL1Q9UNK9 670 aaKnown RBP14.53□□□□□ -0.08
HMGN1-220ENST00000492280 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 ERVV-1B6SEH8 477 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 KINO60870 393 aaKnown RBP14.53□□□□□ -0.08
HMGN1-220ENST00000492280 SLC5A1P13866 664 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 EVX2Q03828 476 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 ARID5BQ14865 1188 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 APOA5Q6Q788 366 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 FBXO18Q8NFZ0 1043 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 NAPBQ9H115 298 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 FAM13BQ9NYF5 915 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
HMGN1-220ENST00000492280 MROH7-TTC4A0A0A0MT08 1334 aa14.52□□□□□ -0.08
HMGN1-220ENST00000492280 PLCH1Q4KWH8 1693 aa14.52□□□□□ -0.08
HMGN1-220ENST00000492280 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.08
HMGN1-220ENST00000492280 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.08
HMGN1-220ENST00000492280 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.08
HMGN1-220ENST00000492280 IFNL3Q8IZI9 196 aa14.52□□□□□ -0.08
HMGN1-220ENST00000492280 PIBF1Q8WXW3 757 aa14.52□□□□□ -0.08
HMGN1-220ENST00000492280 RANBP6O60518 1105 aaKnown RBP14.52□□□□□ -0.09
HMGN1-220ENST00000492280 NTSR2O95665 410 aa14.52□□□□□ -0.09
HMGN1-220ENST00000492280 CHRNDQ07001 517 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms