RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 MICALL2Q8IY33 904 aa19.54■□□□□ 0.72
CLIC4-203ENST00000489758 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
CLIC4-203ENST00000489758 NSUN4Q96CB9 384 aaKnown RBP19.54■□□□□ 0.72
CLIC4-203ENST00000489758 POTECB2RU33 542 aa19.53■□□□□ 0.72
CLIC4-203ENST00000489758 IGSF3O75054 1194 aa19.53■□□□□ 0.72
CLIC4-203ENST00000489758 IDH1O75874 414 aaKnown RBP19.53■□□□□ 0.72
CLIC4-203ENST00000489758 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
CLIC4-203ENST00000489758 RAI14Q9P0K7 980 aa19.53■□□□□ 0.72
CLIC4-203ENST00000489758 CNOT7Q9UIV1 285 aaKnown RBP19.53■□□□□ 0.72
CLIC4-203ENST00000489758 EPS15P42566 896 aa19.52■□□□□ 0.72
CLIC4-203ENST00000489758 MAP3K12Q12852 859 aa19.52■□□□□ 0.72
CLIC4-203ENST00000489758 DIXDC1Q155Q3 683 aa19.52■□□□□ 0.72
CLIC4-203ENST00000489758 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.72
CLIC4-203ENST00000489758 MRIQ9BWK5 157 aa19.52■□□□□ 0.72
CLIC4-203ENST00000489758 MAST3O60307 1309 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 CHGBP05060 677 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 SDSP20132 328 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 MMP14P50281 582 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 HDLBPQ00341 1268 aaKnown RBP19.51■□□□□ 0.71
CLIC4-203ENST00000489758 OGFOD1Q8N543 542 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
CLIC4-203ENST00000489758 TCRBV5S4A2TA0A5A2 114 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 EGFRP00533 1210 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 PDE6AP16499 860 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 CRKP46108 304 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 ADGRA1Q86SQ6 560 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 CNTROBQ8N137 903 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 FAM163AQ96GL9 167 aaPredicted RBP19.5■□□□□ 0.71
CLIC4-203ENST00000489758 MYOZ2Q9NPC6 264 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 HDAC9Q9UKV0 1011 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 PCDHAC2Q9Y5I4 1007 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 MYH13Q9UKX3 1938 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 GAKO14976 1311 aa19.5■□□□□ 0.71
CLIC4-203ENST00000489758 H7C1D1 291 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 LMOD1P29536 600 aaPredicted RBP19.49■□□□□ 0.71
CLIC4-203ENST00000489758 ADD2P35612 726 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 SLFNL1Q499Z3 407 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 SLC9C2Q5TAH2 1124 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
CLIC4-203ENST00000489758 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
CLIC4-203ENST00000489758 HHIPL2Q6UWX4 724 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 MAGEB6Q8N7X4 407 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 MTMR14Q8NCE2 650 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 RILPL2Q969X0 211 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 ZBED3Q96IU2 234 aaPredicted RBP19.49■□□□□ 0.71
CLIC4-203ENST00000489758 FSD1Q9BTV5 496 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.71
CLIC4-203ENST00000489758 HACL1Q9UJ83 578 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 MROH7-TTC4A0A0A0MT08 1334 aa19.49■□□□□ 0.71
CLIC4-203ENST00000489758 DOCK2Q92608 1830 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 RFX7Q2KHR2 1363 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 GSTO1P78417 241 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 CFAP100Q494V2 611 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 TICAM2Q86XR7 235 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 TRPM4Q8TD43 1214 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 TEKT1Q969V4 418 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 ZDHHC15Q96MV8 337 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 DAGLAQ9Y4D2 1042 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 ZNF532Q9HCE3 1301 aa19.48■□□□□ 0.71
CLIC4-203ENST00000489758 IQCA1LA6NCM1 817 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
CLIC4-203ENST00000489758 CYP7A1P22680 504 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 EPHX2P34913 555 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 UBE3CQ15386 1083 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 TBC1D10BQ4KMP7 808 aaPredicted RBP19.47■□□□□ 0.71
CLIC4-203ENST00000489758 APOBEC3HQ6NTF7 200 aaKnown RBP19.47■□□□□ 0.71
CLIC4-203ENST00000489758 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
CLIC4-203ENST00000489758 NMRK2Q9NPI5 230 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 ADARB2Q9NS39 739 aaKnown RBP19.47■□□□□ 0.71
CLIC4-203ENST00000489758 MAST2Q6P0Q8 1798 aa19.47■□□□□ 0.71
CLIC4-203ENST00000489758 SPDYE2BA6NHP3 402 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 KIF3CO14782 793 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 ZFYP08048 801 aaPredicted RBP19.46■□□□□ 0.71
CLIC4-203ENST00000489758 SPDYE6P0CI01 402 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 HSPA6P17066 643 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 HIRAP54198 1017 aaPredicted RBP19.46■□□□□ 0.71
CLIC4-203ENST00000489758 KIF4BQ2VIQ3 1234 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 SLF2Q8IX21 1173 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
CLIC4-203ENST00000489758 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
CLIC4-203ENST00000489758 GPR75-ASB3A0A0A6YYF3 556 aa19.45■□□□□ 0.7
CLIC4-203ENST00000489758 LDHCP07864 332 aa19.45■□□□□ 0.7
CLIC4-203ENST00000489758 DLGAP5Q15398 846 aa19.45■□□□□ 0.7
CLIC4-203ENST00000489758 ADAMTSL1Q8N6G6 1762 aa19.44■□□□□ 0.7
CLIC4-203ENST00000489758 WNT10BO00744 389 aa19.44■□□□□ 0.7
CLIC4-203ENST00000489758 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
CLIC4-203ENST00000489758 RBM5P52756 815 aaKnown RBP eCLIP19.44■□□□□ 0.7
CLIC4-203ENST00000489758 LRRFIP1Q32MZ4 808 aaKnown RBP19.44■□□□□ 0.7
CLIC4-203ENST00000489758 NBPF9Q3BBW0 867 aa19.44■□□□□ 0.7
CLIC4-203ENST00000489758 RBM26Q5T8P6 1007 aaKnown RBP19.44■□□□□ 0.7
CLIC4-203ENST00000489758 BTDP43251 543 aa19.43■□□□□ 0.7
CLIC4-203ENST00000489758 RHBDL3P58872 404 aa19.43■□□□□ 0.7
CLIC4-203ENST00000489758 PPP4CP60510 307 aa19.43■□□□□ 0.7
CLIC4-203ENST00000489758 ZMYM1Q5SVZ6 1142 aa19.43■□□□□ 0.7
CLIC4-203ENST00000489758 USP50Q70EL3 339 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms