RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FAM13AO94988 1023 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 FERP16591 822 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 PLCB3Q01970 1234 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 DPH6Q7L8W6 267 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 VPS16Q9H269 839 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 DZIP3Q86Y13 1208 aaKnown RBP19.87■□□□□ 0.77
NPHP4-209ENST00000489180 IQUBQ8NA54 791 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 CPLX4Q7Z7G2 160 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 FERMT1Q9BQL6 677 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 B4E1Z4 1266 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 HDXQ7Z353 690 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 NLRP3Q96P20 1036 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 UGGT2Q9NYU1 1516 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
NPHP4-209ENST00000489180 CNGA4Q8IV77 575 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 PUS7Q96PZ0 661 aaKnown RBP19.86■□□□□ 0.77
NPHP4-209ENST00000489180 MBD4O95243 580 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 FAM227BQ96M60 508 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 ZBTB21Q9ULJ3 1066 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 FLT4P35916 1363 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 DCAF17Q5H9S7 520 aaPredicted RBP19.86■□□□□ 0.77
NPHP4-209ENST00000489180 IGSF22Q8N9C0 903 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 PPM1EQ8WY54 764 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 DDX12PQ92771 950 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 MAPK8IP1Q9UQF2 711 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 VAV2P52735 878 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 TIMM10P62072 90 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 CCDC63Q8NA47 563 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 UBLCP1Q8WVY7 318 aaPredicted RBP19.86■□□□□ 0.77
NPHP4-209ENST00000489180 USP37Q86T82 979 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 FAM76AQ8TAV0 307 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 CBX8Q9HC52 389 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 KCNK9Q9NPC2 374 aa19.86■□□□□ 0.77
NPHP4-209ENST00000489180 STMN4Q9H169 189 aaPredicted RBP19.85■□□□□ 0.77
NPHP4-209ENST00000489180 TTC31Q49AM3 519 aaPredicted RBP19.85■□□□□ 0.77
NPHP4-209ENST00000489180 KDM2BQ8NHM5 1336 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 FAM212AQ96EL1 285 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 ERO1AQ96HE7 468 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 CLSTN2Q9H4D0 955 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 HELLSQ9NRZ9 838 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 SPDYE3A6NKU9 549 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 KRBA2Q6ZNG9 492 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 TNRQ92752 1358 aa19.85■□□□□ 0.77
NPHP4-209ENST00000489180 RNASE9P60153 205 aaKnown RBP19.84■□□□□ 0.77
NPHP4-209ENST00000489180 ZBTB16Q05516 673 aa19.84■□□□□ 0.77
NPHP4-209ENST00000489180 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
NPHP4-209ENST00000489180 ZNF804AQ7Z570 1209 aa19.84■□□□□ 0.77
NPHP4-209ENST00000489180 ABCC1P33527 1531 aa19.84■□□□□ 0.77
NPHP4-209ENST00000489180 ZNF75DP51815 510 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 LETM2Q2VYF4 491 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 LONRF3Q496Y0 759 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 CFAP58Q5T655 872 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 ANO1Q5XXA6 986 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 GPIHBP1Q8IV16 184 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 CCDC114Q96M63 670 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 NOC4LQ9BVI4 516 aaKnown RBP19.83■□□□□ 0.77
NPHP4-209ENST00000489180 NDUFB9Q9Y6M9 179 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 PPARDQ03181 441 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 PPP1R7Q15435 360 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 ELF2Q15723 593 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 APBB1IPQ7Z5R6 666 aaPredicted RBP19.83■□□□□ 0.77
NPHP4-209ENST00000489180 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.83■□□□□ 0.77
NPHP4-209ENST00000489180 TCHPQ9BT92 498 aa19.83■□□□□ 0.77
NPHP4-209ENST00000489180 SYCP2Q9BX26 1530 aa19.83■□□□□ 0.76
NPHP4-209ENST00000489180 DUOX2Q9NRD8 1548 aa19.83■□□□□ 0.76
NPHP4-209ENST00000489180 FANCCQ00597 558 aa19.83■□□□□ 0.76
NPHP4-209ENST00000489180 KCNH3Q9ULD8 1083 aa19.83■□□□□ 0.76
NPHP4-209ENST00000489180 NPATQ14207 1427 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 HMGB2P26583 209 aaKnown RBP19.82■□□□□ 0.76
NPHP4-209ENST00000489180 CARD6Q9BX69 1037 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 RNMTO43148 476 aaKnown RBP19.82■□□□□ 0.76
NPHP4-209ENST00000489180 TNNC1P63316 161 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 ZNF354CQ86Y25 554 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 ATP6V0A2Q9Y487 856 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
NPHP4-209ENST00000489180 DBNDD2Q9BQY9 259 aa19.82■□□□□ 0.76
NPHP4-209ENST00000489180 HPDP32754 393 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-209ENST00000489180 TNNI3KQ59H18 835 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 RABEP2Q9H5N1 569 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 SAP30BPQ9UHR5 308 aaKnown RBP19.81■□□□□ 0.76
NPHP4-209ENST00000489180 FPGT-TNNI3KV9GXZ4 949 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 PER1O15534 1290 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-209ENST00000489180 PIK3AP1Q6ZUJ8 805 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 TSGA10Q9BZW7 698 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 ATP2A1O14983 1001 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 PPM1FP49593 454 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-209ENST00000489180 ATL3Q6DD88 541 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 CDC37L1Q7L3B6 337 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 NAPGQ99747 312 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-209ENST00000489180 A0A1B0GUL7 405 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 GNA11P29992 359 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 TTC14Q96N46 770 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 ARMT1Q9H993 441 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
NPHP4-209ENST00000489180 CCDC160A6NGH7 325 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 TRAF5O00463 557 aa19.8■□□□□ 0.76
NPHP4-209ENST00000489180 POLR2DO15514 142 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms