RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 FMNL2Q96PY5 1086 aa22.58■■□□□ 1.21
HMG20B-213ENST00000488973 YY1AP1Q9H869 796 aa22.58■■□□□ 1.21
HMG20B-213ENST00000488973 ZNF446Q9NWS9 450 aa22.58■■□□□ 1.21
HMG20B-213ENST00000488973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.58■■□□□ 1.212e-6■■□□□ 11.9
HMG20B-213ENST00000488973 CMA1P23946 247 aa22.58■■□□□ 1.2
HMG20B-213ENST00000488973 PIP4K2AP48426 406 aaPredicted RBP22.58■■□□□ 1.2
HMG20B-213ENST00000488973 BMS1Q14692 1282 aaKnown RBP22.58■■□□□ 1.2
HMG20B-213ENST00000488973 CREBRFQ8IUR6 639 aa22.58■■□□□ 1.2
HMG20B-213ENST00000488973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.58■■□□□ 1.2
HMG20B-213ENST00000488973 POLR3DP05423 398 aaPredicted RBP22.57■■□□□ 1.2
HMG20B-213ENST00000488973 M0R2C6 588 aa22.57■■□□□ 1.2
HMG20B-213ENST00000488973 TATP17735 454 aaPredicted RBP22.57■■□□□ 1.2
HMG20B-213ENST00000488973 ERCC6LQ2NKX8 1250 aa22.57■■□□□ 1.2
HMG20B-213ENST00000488973 OTUD7BQ6GQQ9 843 aa22.57■■□□□ 1.2
HMG20B-213ENST00000488973 SYNE3Q6ZMZ3 975 aa22.57■■□□□ 1.2
HMG20B-213ENST00000488973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.57■■□□□ 1.21e-7■■□□□ 13.4
HMG20B-213ENST00000488973 C4AP0C0L4 1744 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 AXDND1Q5T1B0 1012 aaPredicted RBP22.56■■□□□ 1.2
HMG20B-213ENST00000488973 TTLL5Q6EMB2 1281 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 DDX17Q92841 729 aaKnown RBP22.56■■□□□ 1.2
HMG20B-213ENST00000488973 ORC3Q9UBD5 711 aaPredicted RBP22.56■■□□□ 1.2
HMG20B-213ENST00000488973 PHLPP2Q6ZVD8 1323 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 TJP1Q07157 1748 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
HMG20B-213ENST00000488973 FANCCQ00597 558 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 LRRFIP1Q32MZ4 808 aaKnown RBP22.56■■□□□ 1.2
HMG20B-213ENST00000488973 ANO1Q5XXA6 986 aa22.56■■□□□ 1.2
HMG20B-213ENST00000488973 SPATA31A3Q5VYP0 1347 aa22.55■■□□□ 1.2
HMG20B-213ENST00000488973 BIN1O00499 593 aa22.55■■□□□ 1.2
HMG20B-213ENST00000488973 ETF1P62495 437 aaKnown RBP22.55■■□□□ 1.2
HMG20B-213ENST00000488973 NUP188Q5SRE5 1749 aa22.55■■□□□ 1.2
HMG20B-213ENST00000488973 PFKFB1P16118 471 aa22.55■■□□□ 1.2
HMG20B-213ENST00000488973 IMMTQ16891 758 aaKnown RBP22.55■■□□□ 1.2
HMG20B-213ENST00000488973 EYA2O00167 538 aa22.54■■□□□ 1.2
HMG20B-213ENST00000488973 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
HMG20B-213ENST00000488973 GPHNQ9NQX3 736 aaPredicted RBP22.54■■□□□ 1.2
HMG20B-213ENST00000488973 HPS5Q9UPZ3 1129 aa22.54■■□□□ 1.2
HMG20B-213ENST00000488973 MYH7P12883 1935 aa22.54■■□□□ 1.2
HMG20B-213ENST00000488973 BRINP3Q76B58 766 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 DCAF5Q96JK2 942 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 GLI3P10071 1580 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 KLF18A0A0U1RQI7 1052 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 NPHP1O15259 732 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 PRC1O43663 620 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 KIF23Q02241 960 aaPredicted RBP22.53■■□□□ 1.2
HMG20B-213ENST00000488973 MB21D2Q8IYB1 491 aaPredicted RBP22.53■■□□□ 1.2
HMG20B-213ENST00000488973 TUBE1Q9UJT0 475 aa22.53■■□□□ 1.2
HMG20B-213ENST00000488973 A0A1B0GUL7 405 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 GOLGA8BA8MQT2 603 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 CBFA2T2O43439 604 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 CIAO1O76071 339 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 LMOD1P29536 600 aaPredicted RBP22.52■■□□□ 1.2
HMG20B-213ENST00000488973 ZC3H6P61129 1189 aaKnown RBP22.52■■□□□ 1.2
HMG20B-213ENST00000488973 HOMER1Q86YM7 354 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 HSD3B7Q9H2F3 369 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 PLEKHG2Q9H7P9 1386 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 MEGF6O75095 1541 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 WDR19Q8NEZ3 1342 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
HMG20B-213ENST00000488973 CLCN6P51797 869 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 SLC39A14Q15043 492 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 SRRTQ9BXP5 876 aaKnown RBP22.52■■□□□ 1.2
HMG20B-213ENST00000488973 ATG3Q9NT62 314 aa22.52■■□□□ 1.2
HMG20B-213ENST00000488973 KIF28PB7ZC32 967 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 CPLX1O14810 134 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 CLGNO14967 610 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 ZFYP08048 801 aaPredicted RBP22.51■■□□□ 1.19
HMG20B-213ENST00000488973 LRRN4CLQ8ND94 238 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 TMX1Q9H3N1 280 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 NLRP2Q9NX02 1062 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 CWC25Q9NXE8 425 aaPredicted RBP22.51■■□□□ 1.19
HMG20B-213ENST00000488973 FHOD1Q9Y613 1164 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 FOXP2O15409 715 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 MYO1BO43795 1136 aa22.51■■□□□ 1.19
HMG20B-213ENST00000488973 PKD1L3Q7Z443 1732 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 LRRC24Q50LG9 513 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 ARHGAP29Q52LW3 1261 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 CALCOCO1Q9P1Z2 691 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 MROH7-TTC4A0A0A0MT08 1334 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 WDHD1O75717 1129 aaPredicted RBP22.5■■□□□ 1.19
HMG20B-213ENST00000488973 SYKP43405 635 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 FCHSD1Q86WN1 690 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
HMG20B-213ENST00000488973 GEMIN8Q9NWZ8 242 aaKnown RBP22.5■■□□□ 1.19
HMG20B-213ENST00000488973 HPSEQ9Y251 543 aa22.5■■□□□ 1.19
HMG20B-213ENST00000488973 CPDO75976 1380 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 FGAP02671 866 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 UBASH3AP57075 661 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 MYL5Q02045 173 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 TRIM65Q6PJ69 517 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 ARGLU1Q9NWB6 273 aaPredicted RBP22.49■■□□□ 1.19
HMG20B-213ENST00000488973 DNAI1Q9UI46 699 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 PPP6R2O75170 966 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 ATP1A3P13637 1013 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 HAND2P61296 217 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 UBXN4Q92575 508 aa22.49■■□□□ 1.19
HMG20B-213ENST00000488973 FAM237AA0A1B0GTK4 181 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms