RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 SOX17Q9H6I2 414 aaPredicted RBP9.81□□□□□ -0.84
RTN4-214ENST00000486085 DDX3YO15523 660 aaKnown RBP9.8□□□□□ -0.84
RTN4-214ENST00000486085 SUZ12Q15022 739 aaKnown RBP9.8□□□□□ -0.84
RTN4-214ENST00000486085 METTL16Q86W50 562 aaKnown RBP9.8□□□□□ -0.84
RTN4-214ENST00000486085 FBXO11Q86XK2 927 aa9.8□□□□□ -0.84
RTN4-214ENST00000486085 SRA1Q9HD15 236 aaKnown RBP9.8□□□□□ -0.84
RTN4-214ENST00000486085 NME2P22392 152 aa9.79□□□□□ -0.84
RTN4-214ENST00000486085 CD68P34810 354 aaPredicted RBP9.79□□□□□ -0.84
RTN4-214ENST00000486085 RANGAP1P46060 587 aaPredicted RBP9.79□□□□□ -0.84
RTN4-214ENST00000486085 NLRP12P59046 1061 aa9.79□□□□□ -0.84
RTN4-214ENST00000486085 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
RTN4-214ENST00000486085 STK35Q8TDR2 534 aa9.79□□□□□ -0.84
RTN4-214ENST00000486085 COPRSQ9NQ92 184 aa9.79□□□□□ -0.84
RTN4-214ENST00000486085 TM4SF5O14894 197 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 PRRT3Q5FWE3 981 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 PCNX4Q63HM2 1172 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 TTBK2Q6IQ55 1244 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 NT5DC4Q86YG4 428 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 RELL1Q8IUW5 271 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
RTN4-214ENST00000486085 CBX8Q9HC52 389 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 NOP53Q9NZM5 478 aaKnown RBP9.78□□□□□ -0.84
RTN4-214ENST00000486085 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
RTN4-214ENST00000486085 BMP6P22004 513 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 ARNTP27540 789 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 AP3B2Q13367 1082 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 POU4F3Q15319 338 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
RTN4-214ENST00000486085 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
RTN4-214ENST00000486085 ERMP1Q7Z2K6 904 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
RTN4-214ENST00000486085 KBTBD4Q9NVX7 518 aa9.77□□□□□ -0.85
RTN4-214ENST00000486085 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 ADAM11O75078 769 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 CYP11A1P05108 521 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 RLBP1P12271 317 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 ERCC5P28715 1186 aaPredicted RBP9.76□□□□□ -0.85
RTN4-214ENST00000486085 GBP2P32456 591 aaPredicted RBP9.76□□□□□ -0.85
RTN4-214ENST00000486085 LIG3P49916 1009 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 TLR6Q9Y2C9 796 aa9.76□□□□□ -0.85
RTN4-214ENST00000486085 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 DLL1O00548 723 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 EIF4EBP3O60516 100 aaPredicted RBP9.75□□□□□ -0.85
RTN4-214ENST00000486085 MAOBP27338 520 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 USP48Q86UV5 1035 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 GRIN3AQ8TCU5 1115 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 CORO1BQ9BR76 489 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 EMILIN2Q9BXX0 1053 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 PCDHGB7Q9Y5F8 929 aa9.75□□□□□ -0.85
RTN4-214ENST00000486085 ECEL1O95672 775 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
RTN4-214ENST00000486085 PWP1Q13610 501 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 GRIK4Q16099 956 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 DCAF11Q8TEB1 546 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 UBASH3BQ8TF42 649 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 KCNB2Q92953 911 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 TMEM74Q96NL1 305 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 NRSN2Q9GZP1 204 aa9.74□□□□□ -0.85
RTN4-214ENST00000486085 CTSBP07858 339 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 ELNP15502 786 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 LMNB1P20700 586 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 LRRC14Q15048 493 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 DUOXA2Q1HG44 320 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 AGMOQ6ZNB7 445 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 PDZD3Q86UT5 571 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 PHC3Q8NDX5 983 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 CYP8B1Q9UNU6 501 aa9.73□□□□□ -0.85
RTN4-214ENST00000486085 COL8A1P27658 744 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 RPS26P62854 115 aaKnown RBP9.72□□□□□ -0.85
RTN4-214ENST00000486085 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
RTN4-214ENST00000486085 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
RTN4-214ENST00000486085 LLGL2Q6P1M3 1020 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 IGF2-ASQ6U949 168 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 MPRIPQ6WCQ1 1025 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
RTN4-214ENST00000486085 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.72□□□□□ -0.85
RTN4-214ENST00000486085 PCDHB5Q9Y5E4 795 aa9.72□□□□□ -0.85
RTN4-214ENST00000486085 LOC100289279A0A1B0GTE1 492 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 WISP1O95388 367 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 TFE3P19532 575 aaPredicted RBP9.71□□□□□ -0.86
RTN4-214ENST00000486085 ZNF252P-AS1Q0IIN9 211 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 PDE3AQ14432 1141 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 ZNF654Q8IZM8 581 aa9.71□□□□□ -0.86
RTN4-214ENST00000486085 DLGAP3O95886 979 aa9.7□□□□□ -0.86
RTN4-214ENST00000486085 PF4P02776 101 aa9.7□□□□□ -0.86
RTN4-214ENST00000486085 FAM160A1Q05DH4 1040 aa9.7□□□□□ -0.86
RTN4-214ENST00000486085 TGIF2Q9GZN2 237 aa9.7□□□□□ -0.86
RTN4-214ENST00000486085 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
RTN4-214ENST00000486085 LIG1P18858 919 aa9.69□□□□□ -0.86
RTN4-214ENST00000486085 CAMK2GQ13555 558 aaPredicted RBP9.69□□□□□ -0.86
RTN4-214ENST00000486085 ACAD11Q709F0 780 aa9.69□□□□□ -0.86
RTN4-214ENST00000486085 JARID2Q92833 1246 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms