RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 MYO1BO43795 1136 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 GNAI3P08754 354 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 NF2P35240 595 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 ATG9AQ7Z3C6 839 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
DDX56-212ENST00000485367 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
DDX56-212ENST00000485367 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 SLC5A1P13866 664 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 FGFR2P21802 821 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 BECN1Q14457 450 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
DDX56-212ENST00000485367 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 CIAO1O76071 339 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
DDX56-212ENST00000485367 PRKG1Q13976 671 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 DEFB129Q9H1M3 183 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
DDX56-212ENST00000485367 PA2G4Q9UQ80 394 aaKnown RBP13.16□□□□□ -0.3
DDX56-212ENST00000485367 AOX1Q06278 1338 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 SLC10A3P09131 477 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 TBC1D22AQ8WUA7 517 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 LPIN2Q92539 896 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
DDX56-212ENST00000485367 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 SRGAP3O43295 1099 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 CA12O43570 354 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 CAPN15O75808 1086 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 IL15P40933 162 aaPredicted RBP13.15□□□□□ -0.31
DDX56-212ENST00000485367 AAMPQ13685 434 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 GRIK5Q16478 980 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 ATP2B3Q16720 1220 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 COPRSQ9NQ92 184 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.31
DDX56-212ENST00000485367 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
DDX56-212ENST00000485367 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
DDX56-212ENST00000485367 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
DDX56-212ENST00000485367 COL1A1P02452 1464 aaPredicted RBP13.13□□□□□ -0.31
DDX56-212ENST00000485367 GNAI2P04899 355 aa13.13□□□□□ -0.31
DDX56-212ENST00000485367 CRKP46108 304 aa13.13□□□□□ -0.31
DDX56-212ENST00000485367 TMEM57Q8N5G2 664 aa13.13□□□□□ -0.31
DDX56-212ENST00000485367 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
DDX56-212ENST00000485367 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
DDX56-212ENST00000485367 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
DDX56-212ENST00000485367 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
DDX56-212ENST00000485367 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
DDX56-212ENST00000485367 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 AKAP11Q9UKA4 1901 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 RASA3Q14644 834 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
DDX56-212ENST00000485367 GNL3LQ9NVN8 582 aaKnown RBP13.12□□□□□ -0.31
DDX56-212ENST00000485367 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
DDX56-212ENST00000485367 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
DDX56-212ENST00000485367 MTX1Q13505 466 aa13.11□□□□□ -0.31
DDX56-212ENST00000485367 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
DDX56-212ENST00000485367 FTSJ3Q8IY81 847 aaKnown RBP13.11□□□□□ -0.31
DDX56-212ENST00000485367 WDR66Q8TBY9 1149 aa13.11□□□□□ -0.31
DDX56-212ENST00000485367 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
DDX56-212ENST00000485367 TRPA1O75762 1119 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 ADORA1P30542 326 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
DDX56-212ENST00000485367 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 LDLRAD1Q5T700 205 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 MAST3O60307 1309 aa13.1□□□□□ -0.31
DDX56-212ENST00000485367 PHKA1P46020 1223 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 TIMM10P62072 90 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 TFCP2Q12800 502 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
DDX56-212ENST00000485367 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 SSC5DA1L4H1 1573 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
DDX56-212ENST00000485367 RLBP1P12271 317 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 TNNI2P48788 182 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 CACNB3P54284 484 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 SLC10A4Q96EP9 437 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 MRIQ9BWK5 157 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
DDX56-212ENST00000485367 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms