RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MECOMQ03112 1051 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 TTLL5Q6EMB2 1281 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 EYA3Q99504 573 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 ARMT1Q9H993 441 aa12.09□□□□□ -0.47
HDAC6-226ENST00000483656 RPAP1Q9BWH6 1393 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-226ENST00000483656 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 FGAP02671 866 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 BECN1Q14457 450 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 SPTY2D1Q68D10 685 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-226ENST00000483656 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-226ENST00000483656 LCORLQ8N3X6 602 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
HDAC6-226ENST00000483656 UPF3BQ9BZI7 483 aaKnown RBP12.08□□□□□ -0.48
HDAC6-226ENST00000483656 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.48
HDAC6-226ENST00000483656 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
HDAC6-226ENST00000483656 PRKAB2O43741 272 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 IGSF3O75054 1194 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 CPA1P15085 419 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 NEK4P51957 841 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 DYNLL1P63167 89 aaKnown RBP12.07□□□□□ -0.48
HDAC6-226ENST00000483656 GTF2IP78347 998 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 ALX1Q15699 326 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 ZGPATQ8N5A5 531 aaKnown RBP12.07□□□□□ -0.48
HDAC6-226ENST00000483656 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
HDAC6-226ENST00000483656 TTC14Q96N46 770 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 EPB41L4AQ9HCS5 686 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-226ENST00000483656 PIM2Q9P1W9 311 aa12.07□□□□□ -0.48
HDAC6-226ENST00000483656 MAST2Q6P0Q8 1798 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
HDAC6-226ENST00000483656 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-226ENST00000483656 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 RNF20Q5VTR2 975 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-226ENST00000483656 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 CERS5Q8N5B7 392 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
HDAC6-226ENST00000483656 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-226ENST00000483656 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
HDAC6-226ENST00000483656 AOC3Q16853 763 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 MFSD14BQ5SR56 506 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 RTKN2Q8IZC4 609 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 IFNL3Q8IZI9 196 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 TBC1D22AQ8WUA7 517 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 PSMD1Q99460 953 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
HDAC6-226ENST00000483656 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
HDAC6-226ENST00000483656 ST18O60284 1047 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 ECE2O60344 883 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 GNAT2P19087 354 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
HDAC6-226ENST00000483656 RUFY3Q7L099 469 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
HDAC6-226ENST00000483656 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-226ENST00000483656 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-226ENST00000483656 CCDC88AQ3V6T2 1871 aa12.04□□□□□ -0.48
HDAC6-226ENST00000483656 COL4A5P29400 1685 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 YDJCA8MPS7 323 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 E7EWF7 191 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 APPP05067 770 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 PPP4CP60510 307 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 HAND2P61296 217 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 GSTO1P78417 241 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 KRT32Q14532 448 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-226ENST00000483656 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDAC6-226ENST00000483656 CYP46A1Q9Y6A2 500 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 TACC3Q9Y6A5 838 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
HDAC6-226ENST00000483656 GPR75-ASB3A0A0A6YYF3 556 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 G3V3G9 751 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 LDHCP07864 332 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 PSMA5P28066 241 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 AK2P54819 239 aa12.02□□□□□ -0.49
HDAC6-226ENST00000483656 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms