RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 ARAP2Q8WZ64 1704 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
VARS-225ENST00000482996 A0A1B0GUL7 405 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 ADORA1P30542 326 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 PHKA1P46020 1223 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 TIMM10P62072 90 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
VARS-225ENST00000482996 POLA2Q14181 598 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
VARS-225ENST00000482996 SUPT20HL1Q3ZLR7 823 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 MRIQ9BWK5 157 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 TDRD3Q9H7E2 651 aaKnown RBP17.16■□□□□ 0.34
VARS-225ENST00000482996 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
VARS-225ENST00000482996 ZNF70Q9UC06 446 aaPredicted RBP17.16■□□□□ 0.34
VARS-225ENST00000482996 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 SLC10A3P09131 477 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 COL13A1Q5TAT6 717 aaPredicted RBP17.15■□□□□ 0.34
VARS-225ENST00000482996 CCDC102BQ68D86 513 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 MOB2Q70IA6 237 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 AOX1Q06278 1338 aa17.15■□□□□ 0.34
VARS-225ENST00000482996 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.34
VARS-225ENST00000482996 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
VARS-225ENST00000482996 ZBTB22O15209 634 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 CA12O43570 354 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 TNNI2P48788 182 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 PRKG1Q13976 671 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 RASA3Q14644 834 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 GORABQ5T7V8 394 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
VARS-225ENST00000482996 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 PRDM10Q9NQV6 1147 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
VARS-225ENST00000482996 MYH13Q9UKX3 1938 aa17.13■□□□□ 0.33
VARS-225ENST00000482996 PPP1R12BO60237 982 aaPredicted RBP17.13■□□□□ 0.33
VARS-225ENST00000482996 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
VARS-225ENST00000482996 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
VARS-225ENST00000482996 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
VARS-225ENST00000482996 HHIPL2Q6UWX4 724 aa17.13■□□□□ 0.33
VARS-225ENST00000482996 RASAL3Q86YV0 1011 aa17.13■□□□□ 0.33
VARS-225ENST00000482996 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
VARS-225ENST00000482996 ANGEL1Q9UNK9 670 aaKnown RBP17.13■□□□□ 0.33
VARS-225ENST00000482996 LBX1P52954 281 aa17.12■□□□□ 0.33
VARS-225ENST00000482996 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
VARS-225ENST00000482996 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
VARS-225ENST00000482996 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
VARS-225ENST00000482996 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
VARS-225ENST00000482996 PDS5AQ29RF7 1337 aaKnown RBP17.12■□□□□ 0.33
VARS-225ENST00000482996 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
VARS-225ENST00000482996 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 RASGRF1Q13972 1273 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
VARS-225ENST00000482996 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
VARS-225ENST00000482996 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
VARS-225ENST00000482996 PRDX5P30044 214 aa17.1■□□□□ 0.33
VARS-225ENST00000482996 LDLRAD1Q5T700 205 aa17.1■□□□□ 0.33
VARS-225ENST00000482996 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
VARS-225ENST00000482996 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
VARS-225ENST00000482996 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
VARS-225ENST00000482996 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
VARS-225ENST00000482996 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
VARS-225ENST00000482996 IREB2P48200 963 aaKnown RBP17.09■□□□□ 0.33
VARS-225ENST00000482996 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
VARS-225ENST00000482996 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
VARS-225ENST00000482996 DAGLAQ9Y4D2 1042 aa17.09■□□□□ 0.33
VARS-225ENST00000482996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
VARS-225ENST00000482996 UNCXA6NJT0 531 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 TNNI3KQ59H18 835 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.32
VARS-225ENST00000482996 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 SLC10A4Q96EP9 437 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 FPGT-TNNI3KV9GXZ4 949 aa17.08■□□□□ 0.32
VARS-225ENST00000482996 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
VARS-225ENST00000482996 CACNB3P54284 484 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 PDE3AQ14432 1141 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 SAGE1Q9NXZ1 904 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 TSKSQ9UJT2 592 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
VARS-225ENST00000482996 HMMRO75330 724 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 CAPN15O75808 1086 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms