RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DZIP1LQ8IYY4 767 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-207ENST00000481335 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 MANSC4A6NHS7 340 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 SLC34A2O95436 690 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 CRKP46108 304 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 RASA3Q14644 834 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 KLHDC4Q8TBB5 520 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 TEKT1Q969V4 418 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 PCDHAC2Q9Y5I4 1007 aa15.14■□□□□ 0.01
SQSTM1-207ENST00000481335 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
SQSTM1-207ENST00000481335 INTS3Q68E01 1043 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-207ENST00000481335 ANKRD13AQ8IZ07 590 aa15.13■□□□□ 0.01
SQSTM1-207ENST00000481335 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
SQSTM1-207ENST00000481335 SLC10A4Q96EP9 437 aa15.13■□□□□ 0.01
SQSTM1-207ENST00000481335 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 GNAI3P08754 354 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 IL15P40933 162 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 RGS19P49795 217 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 BCAMP50895 628 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 PRKG1Q13976 671 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 PKN2Q16513 984 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 NBPF12Q5TAG4 269 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 CTU1Q7Z7A3 348 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 ZDHHC15Q96MV8 337 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 COPRSQ9NQ92 184 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
SQSTM1-207ENST00000481335 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 SEMA3EO15041 775 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 HHIPL2Q6UWX4 724 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 HOOK2Q96ED9 719 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 GNL3LQ9NVN8 582 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 TMOD2Q9NZR1 351 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 IQSEC3Q9UPP2 1182 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 LRRFIP2Q9Y608 721 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 AOX1Q06278 1338 aa15.11■□□□□ 0.01
SQSTM1-207ENST00000481335 USP2O75604 605 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 MTX1Q13505 466 aa15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 ATP2B3Q16720 1220 aa15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 WNK4Q96J92 1243 aa15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 TEPSINQ96N21 525 aa15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
SQSTM1-207ENST00000481335 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
SQSTM1-207ENST00000481335 MEIS3Q99687 375 aa15.09■□□□□ 0.01
SQSTM1-207ENST00000481335 PDS5AQ29RF7 1337 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-207ENST00000481335 GPR25O00155 361 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 IFNL1Q8IU54 200 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 ZGPATQ8N5A5 531 aaKnown RBP15.08■□□□□ 0
SQSTM1-207ENST00000481335 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
SQSTM1-207ENST00000481335 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 SIL1Q9H173 461 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
SQSTM1-207ENST00000481335 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
SQSTM1-207ENST00000481335 TESPA1A2RU30 521 aaPredicted RBP15.07■□□□□ 0
SQSTM1-207ENST00000481335 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
SQSTM1-207ENST00000481335 TBC1D8O95759 1140 aa15.07■□□□□ 0
SQSTM1-207ENST00000481335 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
SQSTM1-207ENST00000481335 GRIK5Q16478 980 aa15.07■□□□□ 0
SQSTM1-207ENST00000481335 APOBEC3HQ6NTF7 200 aaKnown RBP15.07■□□□□ 0
SQSTM1-207ENST00000481335 FZD1Q9UP38 647 aa15.07■□□□□ 0
SQSTM1-207ENST00000481335 FKTNO75072 461 aa15.06■□□□□ 0
SQSTM1-207ENST00000481335 TRIM27P14373 513 aa15.06■□□□□ 0
SQSTM1-207ENST00000481335 MLLT1Q03111 559 aaPredicted RBP15.06■□□□□ 0
SQSTM1-207ENST00000481335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
SQSTM1-207ENST00000481335 TMEM39BQ9GZU3 492 aa15.06■□□□□ 0
SQSTM1-207ENST00000481335 AKAP2Q9Y2D5 859 aa15.06■□□□□ 0
SQSTM1-207ENST00000481335 CSADQ9Y600 493 aa15.06■□□□□ 0
SQSTM1-207ENST00000481335 AK9Q5TCS8 1911 aa15.05■□□□□ 0
SQSTM1-207ENST00000481335 SRGAP3O43295 1099 aa15.05■□□□□ -0
SQSTM1-207ENST00000481335 MAP3K9P80192 1104 aa15.05■□□□□ -0
SQSTM1-207ENST00000481335 DCAF15Q66K64 600 aa15.05■□□□□ -0
SQSTM1-207ENST00000481335 DOCK2Q92608 1830 aa15.04■□□□□ -0
SQSTM1-207ENST00000481335 GNAI2P04899 355 aa15.04■□□□□ -0
SQSTM1-207ENST00000481335 LDHBP07195 334 aaKnown RBP15.04■□□□□ -0
SQSTM1-207ENST00000481335 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.04■□□□□ -0
SQSTM1-207ENST00000481335 OPTNQ96CV9 577 aa15.04■□□□□ -0
SQSTM1-207ENST00000481335 PA2G4Q9UQ80 394 aaKnown RBP15.04■□□□□ -0
SQSTM1-207ENST00000481335 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
SQSTM1-207ENST00000481335 PRDX5P30044 214 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 GJA5P36382 358 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 GTF2A2P52657 109 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 VGLL4Q14135 290 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
SQSTM1-207ENST00000481335 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 CCDC102BQ68D86 513 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 FBXO46Q6PJ61 603 aaPredicted RBP15.03■□□□□ -0
SQSTM1-207ENST00000481335 SLF2Q8IX21 1173 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 FAM151AQ8WW52 585 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 ELP3Q9H9T3 547 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 ZCCHC17Q9NP64 241 aaKnown RBP15.03■□□□□ -0
SQSTM1-207ENST00000481335 DAGLAQ9Y4D2 1042 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 PDE4DIPQ5VU43 2346 aa15.03■□□□□ -0
SQSTM1-207ENST00000481335 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms