RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CDCA5Q96FF9 252 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 GNL3LQ9NVN8 582 aaKnown RBP15.06■□□□□ 0
PTPRF-213ENST00000481019 DENND2AQ9ULE3 1009 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 PITPNM2Q9BZ72 1349 aa15.06■□□□□ 0
PTPRF-213ENST00000481019 AKAP11Q9UKA4 1901 aa15.05■□□□□ 0
PTPRF-213ENST00000481019 SEMA3EO15041 775 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 ZBTB22O15209 634 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 MMP14P50281 582 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 RBM5P52756 815 aaKnown RBP eCLIP15.05■□□□□ -0
PTPRF-213ENST00000481019 DIXDC1Q155Q3 683 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 TBC1D9Q6ZT07 1266 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 SULF1Q8IWU6 871 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 ZNF384Q8TF68 577 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 KLRG1Q96E93 195 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 CHMP4BQ9H444 224 aaKnown RBP15.05■□□□□ -0
PTPRF-213ENST00000481019 TDRD3Q9H7E2 651 aaKnown RBP15.05■□□□□ -0
PTPRF-213ENST00000481019 SNRKQ9NRH2 765 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 SERPINA10Q9UK55 444 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 SALL1Q9NSC2 1324 aa15.05■□□□□ -0
PTPRF-213ENST00000481019 SMARCA5O60264 1052 aaPredicted RBP15.04■□□□□ -0
PTPRF-213ENST00000481019 HMMRO75330 724 aa15.04■□□□□ -0
PTPRF-213ENST00000481019 AAMPQ13685 434 aa15.04■□□□□ -0
PTPRF-213ENST00000481019 GORABQ5T7V8 394 aa15.04■□□□□ -0
PTPRF-213ENST00000481019 AACSQ86V21 672 aa15.04■□□□□ -0
PTPRF-213ENST00000481019 SPATA5Q8NB90 893 aa15.04■□□□□ -0
PTPRF-213ENST00000481019 ZNF70Q9UC06 446 aaPredicted RBP15.04■□□□□ -0
PTPRF-213ENST00000481019 CNTNAP1P78357 1384 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 PDS5AQ29RF7 1337 aaKnown RBP15.03■□□□□ -0
PTPRF-213ENST00000481019 CACNB3P54284 484 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 APOBEC3HQ6NTF7 200 aaKnown RBP15.03■□□□□ -0
PTPRF-213ENST00000481019 MOB2Q70IA6 237 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 ERC1Q8IUD2 1116 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 CDAN1Q8IWY9 1227 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 BCL11AQ9H165 835 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 TLL2Q9Y6L7 1015 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
PTPRF-213ENST00000481019 MYO5AQ9Y4I1 1855 aaKnown RBP15.03■□□□□ -0
PTPRF-213ENST00000481019 SSC5DA1L4H1 1573 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 HDLBPQ00341 1268 aaKnown RBP15.02■□□□□ -0
PTPRF-213ENST00000481019 TTC39AQ5SRH9 613 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 SAPCD2Q86UD0 394 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 TEKT1Q969V4 418 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 VEZTQ9HBM0 779 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 ABT1Q9ULW3 272 aaKnown RBP15.02■□□□□ -0
PTPRF-213ENST00000481019 FZD1Q9UP38 647 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 SUGT1Q9Y2Z0 365 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 DAGLAQ9Y4D2 1042 aa15.02■□□□□ -0
PTPRF-213ENST00000481019 RASSF10A6NK89 507 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
PTPRF-213ENST00000481019 UQCRFS1P1P0C7P4 283 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 ZAP70P43403 619 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 VEGFBP49765 207 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 HSP90AB4PQ58FF6 505 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 MRIQ9BWK5 157 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 DEFB129Q9H1M3 183 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 DCTPP1Q9H773 170 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
PTPRF-213ENST00000481019 ABCF2Q9UG63 623 aa15.01□□□□□ -0.01
PTPRF-213ENST00000481019 MYH2Q9UKX2 1941 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 TCP10L2B9ZVM9 353 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 RAB11FIP3O75154 756 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
PTPRF-213ENST00000481019 IRX6P78412 446 aaPredicted RBP15□□□□□ -0.01
PTPRF-213ENST00000481019 MECOMQ03112 1051 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 CYP4F22Q6NT55 531 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 HHIPL2Q6UWX4 724 aa15□□□□□ -0.01
PTPRF-213ENST00000481019 APOBEC3FQ8IUX4 373 aaKnown RBP15□□□□□ -0.01
PTPRF-213ENST00000481019 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
PTPRF-213ENST00000481019 GBA2Q9HCG7 927 aaPredicted RBP15□□□□□ -0.01
PTPRF-213ENST00000481019 RASA3Q14644 834 aa14.99□□□□□ -0.01
PTPRF-213ENST00000481019 DEFB115Q30KQ5 88 aa14.99□□□□□ -0.01
PTPRF-213ENST00000481019 CDC42EP5Q6NZY7 148 aa14.99□□□□□ -0.01
PTPRF-213ENST00000481019 ANTXR1Q9H6X2 564 aa14.99□□□□□ -0.01
PTPRF-213ENST00000481019 GAKO14976 1311 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 MAST3O60307 1309 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 UBE2Q2LH0YL09 131 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 MYO1BO43795 1136 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 PRKG1Q13976 671 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-213ENST00000481019 JMYQ8N9B5 988 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 NSUN4Q96CB9 384 aaKnown RBP14.98□□□□□ -0.01
PTPRF-213ENST00000481019 TEPSINQ96N21 525 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 TMEM39BQ9GZU3 492 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
PTPRF-213ENST00000481019 AOC2O75106 756 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 HUNKP57058 714 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 NFIAQ12857 509 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 GRM1Q13255 1194 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 DZIP1Q86YF9 867 aaKnown RBP14.97□□□□□ -0.01
PTPRF-213ENST00000481019 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
PTPRF-213ENST00000481019 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 PAPPA2Q9BXP8 1791 aa14.97□□□□□ -0.01
PTPRF-213ENST00000481019 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms