RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
DENND4B-208ENST00000480340 MPNDQ8N594 471 aa16.74■□□□□ 0.27
DENND4B-208ENST00000480340 POLLQ9UGP5 575 aa16.74■□□□□ 0.27
DENND4B-208ENST00000480340 IRS2Q9Y4H2 1338 aa16.74■□□□□ 0.27
DENND4B-208ENST00000480340 RNF113AO15541 343 aaKnown RBP16.74■□□□□ 0.27
DENND4B-208ENST00000480340 COL1A1P02452 1464 aaPredicted RBP16.74■□□□□ 0.27
DENND4B-208ENST00000480340 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
DENND4B-208ENST00000480340 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
DENND4B-208ENST00000480340 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
DENND4B-208ENST00000480340 CCDC39Q9UFE4 941 aa16.73■□□□□ 0.27
DENND4B-208ENST00000480340 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
DENND4B-208ENST00000480340 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
DENND4B-208ENST00000480340 LSG1Q9H089 658 aaKnown RBP16.73■□□□□ 0.27
DENND4B-208ENST00000480340 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
DENND4B-208ENST00000480340 RAD50Q92878 1312 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 A0A0G2JLW4 131 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 PTH1RQ03431 593 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 MED23Q9ULK4 1368 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 MCM5P33992 734 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
DENND4B-208ENST00000480340 WASHC4Q2M389 1173 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.72■□□□□ 0.272e-7■■■□□ 17.4
DENND4B-208ENST00000480340 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 DENND2AQ9ULE3 1009 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 JAG2Q9Y219 1238 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 CHD4Q14839 1912 aa16.72■□□□□ 0.27
DENND4B-208ENST00000480340 DPEP1P16444 411 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 NEK4P51957 841 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 ZMYM1Q5SVZ6 1142 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 SASS6Q6UVJ0 657 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 NOL8Q76FK4 1167 aaKnown RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 DUOX1Q9NRD9 1551 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 ZNF804AQ7Z570 1209 aa16.71■□□□□ 0.27
DENND4B-208ENST00000480340 GOLGB1Q14789 3259 aaKnown RBP16.71■□□□□ 0.27
DENND4B-208ENST00000480340 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 TSC1Q92574 1164 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 OSBP2Q969R2 916 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 GDPD2Q9HCC8 539 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 BRD1O95696 1058 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
DENND4B-208ENST00000480340 C15orf52Q6ZUT6 534 aaKnown RBP16.7■□□□□ 0.26
DENND4B-208ENST00000480340 HELLSQ9NRZ9 838 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 MAST3O60307 1309 aa16.7■□□□□ 0.26
DENND4B-208ENST00000480340 M0R2C6 588 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 SEMA3EO15041 775 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 GADD45BO75293 160 aaPredicted RBP16.69■□□□□ 0.26
DENND4B-208ENST00000480340 PDE6AP16499 860 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 ADD2P35612 726 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 MCCP23508 829 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 DMTNQ08495 405 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 MAGEB6Q8N7X4 407 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
DENND4B-208ENST00000480340 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
DENND4B-208ENST00000480340 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
DENND4B-208ENST00000480340 KCNA3P22001 575 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 TTLL6Q8N841 843 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 APPBP2Q92624 585 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 PUS7LQ9H0K6 701 aaKnown RBP16.68■□□□□ 0.26
DENND4B-208ENST00000480340 CD209Q9NNX6 404 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
DENND4B-208ENST00000480340 C21orf2O43822 256 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 MBD3O95983 291 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
DENND4B-208ENST00000480340 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 RAI14Q9P0K7 980 aa16.68■□□□□ 0.26
DENND4B-208ENST00000480340 SGIP1Q9BQI5 828 aa16.67■□□□□ 0.26
DENND4B-208ENST00000480340 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
DENND4B-208ENST00000480340 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
DENND4B-208ENST00000480340 C7orf43Q8WVR3 580 aa16.67■□□□□ 0.26
DENND4B-208ENST00000480340 ZC3H12CQ9C0D7 883 aaKnown RBP16.67■□□□□ 0.26
DENND4B-208ENST00000480340 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
DENND4B-208ENST00000480340 HSPA4P34932 840 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 VPS53Q5VIR6 699 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 TCRBV5S4A2TA0A5A2 114 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
DENND4B-208ENST00000480340 PTGER2P43116 358 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 FGD1P98174 961 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
DENND4B-208ENST00000480340 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 641.5 ms