RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	PPEF1	O14829	653 aa	Predicted RBP	10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ALDH1L1	O75891	902 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CASP7	P55210	303 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GCKR	Q14397	625 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	LARP1B	Q659C4	914 aa	Known RBP	10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CC2D2B	Q6DHV5	1058 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RBM43	Q6ZSC3	357 aa	Known RBP	10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RTKN2	Q8IZC4	609 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739	KCNF1	Q9H3M0	494 aa		10.7	□□□□□ -0.7
SH3YL1-222	ENST00000479739		H7C1W4	665 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	KIF20A	O95235	890 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	LARGE1	O95461	756 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	IFIT2	P09913	472 aa	Known RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TYRO3	Q06418	890 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GRAP	Q13588	217 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GRAPL	Q8TC17	118 aa	Predicted RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ATP6V0A2	Q9Y487	856 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GOLGA6L4	A6NEF3	574 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PDE8A	O60658	829 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	BBOX1	O75936	387 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	HSP90B1	P14625	803 aa	Known RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ZSCAN20	P17040	1043 aa	Predicted RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ME3	Q16798	604 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PPP4R3B	Q5MIZ7	849 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	DDX46	Q7L014	1031 aa	Known RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	BBX	Q8WY36	941 aa	Predicted RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	JARID2	Q92833	1246 aa	Predicted RBP	10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	MAP4K1	Q92918	833 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PSMD1	Q99460	953 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TNMD	Q9H2S6	317 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	HMG20B	Q9P0W2	317 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PAXBP1	Q9Y5B6	917 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	LTBP1	Q14766	1721 aa		10.69	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RIOK3	O14730	519 aa	Known RBP	10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GRIPAP1	Q4V328	841 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TTC6	Q86TZ1	520 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PYCARD	Q9ULZ3	195 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	MRVI1	Q9Y6F6	885 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	DUOX1	Q9NRD9	1551 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SMTNL1	A8MU46	457 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	AP5Z1	O43299	807 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	NEMF	O60524	1076 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CDC25B	P30305	580 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PTH1R	Q03431	593 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ADCK5	Q3MIX3	580 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TSGA10IP	Q3SY00	556 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CREB3L3	Q68CJ9	461 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SP8	Q8IXZ3	490 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TDRD7	Q8NHU6	1098 aa	Known RBP	10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CELF1	Q92879	486 aa	Known RBP	10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PLA2G12B	Q9BX93	195 aa		10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RBM8A	Q9Y5S9	174 aa	Known RBP	10.68	□□□□□ -0.7
SH3YL1-222	ENST00000479739	COL4A5	P29400	1685 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	KCNJ4	P48050	445 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	BLOC1S2	Q6QNY1	142 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	UBE3B	Q7Z3V4	1068 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TMC4	Q7Z404	712 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SPATA32	Q96LK8	384 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RTL9	Q8NET4	1388 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	MYH15	Q9Y2K3	1946 aa		10.67	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CTSW	P56202	376 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ST3GAL1	Q11201	340 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	KRT32	Q14532	448 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	PLA2G4D	Q86XP0	818 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	MPND	Q8N594	471 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SPC24	Q8NBT2	197 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TTLL11	Q8NHH1	800 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CLSTN2	Q9H4D0	955 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CCDC152	Q4G0S7	254 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ZNF526	Q8TF50	670 aa	Predicted RBP	10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SEC31B	Q9NQW1	1179 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	TPCN1	Q9ULQ1	816 aa		10.66	□□□□□ -0.7
SH3YL1-222	ENST00000479739	SLC27A2	O14975	620 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CTAGE5	O15320	804 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CPA1	P15085	419 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	IARS	P41252	1262 aa	Known RBP	10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	LARP6	Q9BRS8	491 aa	Known RBP	10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CBX8	Q9HC52	389 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CGN	Q9P2M7	1197 aa	Known RBP	10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	CFAP45	Q9UL16	551 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	WDR90	Q96KV7	1748 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	RFX7	Q2KHR2	1363 aa		10.65	□□□□□ -0.7
SH3YL1-222	ENST00000479739	GLTPD2	A6NH11	291 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	KIF3C	O14782	793 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CSF1R	P07333	972 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	PTGS1	P23219	599 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	RPS6KB1	P23443	525 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	BRD2	P25440	801 aa	Known RBP	10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ZNF75D	P51815	510 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	RPS8	P62241	208 aa	Known RBP	10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	CBX1	P83916	185 aa		10.65	□□□□□ -0.71
SH3YL1-222	ENST00000479739	ANO6	Q4KMQ2	910 aa		10.65	□□□□□ -0.71

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