RNA–Protein interactions for RNA: ENST00000478843.5

PRKCD-205, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-205ENST00000478843 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
PRKCD-205ENST00000478843 TMEM39BQ9GZU3 492 aa12.15□□□□□ -0.46
PRKCD-205ENST00000478843 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
PRKCD-205ENST00000478843 COLQQ9Y215 455 aaPredicted RBP12.15□□□□□ -0.46
PRKCD-205ENST00000478843 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
PRKCD-205ENST00000478843 IL16Q14005 1332 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 GTF2A2P52657 109 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
PRKCD-205ENST00000478843 TDRD7Q8NHU6 1098 aaKnown RBP12.14□□□□□ -0.47
PRKCD-205ENST00000478843 ARHGAP39Q9C0H5 1083 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 TTF2Q9UNY4 1162 aaKnown RBP12.14□□□□□ -0.47
PRKCD-205ENST00000478843 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 COL6A3P12111 3177 aa12.14□□□□□ -0.47
PRKCD-205ENST00000478843 CRKP46108 304 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 SHISA4Q96DD7 197 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 SNCAIPQ9Y6H5 919 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
PRKCD-205ENST00000478843 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
PRKCD-205ENST00000478843 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 F6X3S4 739 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 H0YGN5 161 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 CENPBP07199 599 aaPredicted RBP12.12□□□□□ -0.47
PRKCD-205ENST00000478843 GYG1P46976 350 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 MAP3K9P80192 1104 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
PRKCD-205ENST00000478843 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 GRIK5Q16478 980 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 LDHAL6AQ6ZMR3 332 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 SH3TC2Q8TF17 1288 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
PRKCD-205ENST00000478843 CSADQ9Y600 493 aa12.12□□□□□ -0.47
PRKCD-205ENST00000478843 PTPRFP10586 1907 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 GRM8O00222 908 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 PLIN1O60240 522 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 TLR2O60603 784 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 FAM84BQ96KN1 310 aaPredicted RBP12.11□□□□□ -0.47
PRKCD-205ENST00000478843 CNNM1Q9NRU3 951 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 ADGRA2Q96PE1 1338 aa12.11□□□□□ -0.47
PRKCD-205ENST00000478843 ALPK3Q96L96 1907 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 BTBD19C9JJ37 291 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 VAMP4O75379 141 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 MYCP01106 439 aaPredicted RBP12.1□□□□□ -0.47
PRKCD-205ENST00000478843 CETPP11597 493 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 CTGFP29279 349 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
PRKCD-205ENST00000478843 TNNI2P48788 182 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 CACNB3P54284 484 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 CCDC184Q52MB2 194 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 TAF7LQ5H9L4 462 aa12.1□□□□□ -0.47
PRKCD-205ENST00000478843 CUL9Q8IWT3 2517 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 A0A0C4DFX4 3053 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 IRF6O14896 467 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 HDLBPQ00341 1268 aaKnown RBP12.09□□□□□ -0.47
PRKCD-205ENST00000478843 PPIL2Q13356 520 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
PRKCD-205ENST00000478843 ERO1BQ86YB8 467 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 WRNIP1Q96S55 665 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
PRKCD-205ENST00000478843 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
PRKCD-205ENST00000478843 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 GNRH1P01148 92 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 PRMT2P55345 433 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 SNAPC2Q13487 334 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 FBXO33Q7Z6M2 555 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 ZKSCAN4Q969J2 545 aaPredicted RBP12.08□□□□□ -0.48
PRKCD-205ENST00000478843 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 SUCLG2Q96I99 432 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
PRKCD-205ENST00000478843 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
PRKCD-205ENST00000478843 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
PRKCD-205ENST00000478843 KIF22Q14807 665 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 MTFR1Q15390 333 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
PRKCD-205ENST00000478843 C17orf99Q6UX52 265 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 FAM83AQ86UY5 434 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 ZDHHC15Q96MV8 337 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 PRO3102Q9H379 93 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
PRKCD-205ENST00000478843 RIPOR2Q9Y4F9 1068 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
PRKCD-205ENST00000478843 WDHD1O75717 1129 aaPredicted RBP12.06□□□□□ -0.48
PRKCD-205ENST00000478843 ALDH1L1O75891 902 aa12.06□□□□□ -0.48
PRKCD-205ENST00000478843 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
PRKCD-205ENST00000478843 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms